An implementation of sensitivity analysis for phylogenetic comparative methods. The package is an umbrella of statistical and graphical methods that estimate and report different types of uncertainty in PCM: (i) Species Sampling uncertainty (sample size; influential species and clades). (ii) Phylogenetic uncertainty (different topologies and/or branch lengths). (iii) Data uncertainty (intraspecific variation and measurement error).
Version: 0.8.5 Depends: R (≥ 3.4.0), ape (≥ 3.3), phylolm (≥ 2.4), ggplot2 (≥ 2.1.0) Imports: caper (≥ 0.5.2), phytools (≥ 0.6), geiger (≥ 2.0) Suggests: knitr, rmarkdown Published: 2020-04-02 DOI: 10.32614/CRAN.package.sensiPhy Author: Gustavo Paterno [cre, aut], Gijsbert Werner [aut], Caterina Penone [aut], Pablo Martinez [ctb] Maintainer: Gustavo Paterno <paternogbc at gmail.com> BugReports: https://github.com/paternogbc/sensiPhy/issues License: GPL-2 URL: https://github.com/paternogbc/sensiPhy NeedsCompilation: no Citation: sensiPhy citation info Materials: NEWS CRAN checks: sensiPhy results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=sensiPhy to link to this page.
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