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CRAN: Package microPop

microPop: Process-Based Modelling of Microbial Populations

Modelling interacting microbial populations - example applications include human gut microbiota, rumen microbiota and phytoplankton. Solves a system of ordinary differential equations to simulate microbial growth and resource uptake over time. This version contains network visualisation functions.

Version: 1.6 Depends: deSolve, visNetwork Imports: testthat, methods Suggests: rmarkdown, R.rsp, knitr, webshot Published: 2022-02-03 DOI: 10.32614/CRAN.package.microPop Author: Helen Kettle [aut, cre] Maintainer: Helen Kettle <Helen.Kettle at bioss.ac.uk> License: GPL-3 | file LICENSE URL: https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/2041-210X.12873 NeedsCompilation: no CRAN checks: microPop results Documentation: Reference manual: microPop.pdf Vignettes: microPop Tutorial
Networks
Downloads: Package source: microPop_1.6.tar.gz Windows binaries: r-devel: microPop_1.6.zip, r-release: microPop_1.6.zip, r-oldrel: microPop_1.6.zip macOS binaries: r-release (arm64): microPop_1.6.tgz, r-oldrel (arm64): microPop_1.6.tgz, r-release (x86_64): microPop_1.6.tgz, r-oldrel (x86_64): microPop_1.6.tgz Old sources: microPop archive Linking:

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