One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL (Quantitative Trait Loci). clusterhap groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, clusterhap groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, clusterhap calculates such probability from relative frequencies.
Version: 0.1 Depends: R (≥ 2.10) Imports: graphics, utils Suggests: knitr, rmarkdown, testthat Published: 2016-05-16 DOI: 10.32614/CRAN.package.clusterhap Author: Gaston Quero and Sebastian Simondi , with contributions from Victoria Bonnecarrere and Lucia Gutierrez Maintainer: Gaston Quero <gastonquero at gmail.com> License: GPL-3 NeedsCompilation: no CRAN checks: clusterhap results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=clusterhap to link to this page.
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