A toolkit to detect clusters from distance matrices. The distance matrices are assumed to be calculated between the cells of multiple animals ('Caenorhabditis elegans') from input time-series matrices. Some functions for generating distance matrices, performing clustering, evaluating the clustering, and visualizing the results of clustering and evaluation are available. We're also providing the download function to retrieve the calculated distance matrices from 'figshare' <https://figshare.com>.
Version: 0.1.1 Depends: R (≥ 4.1.0) Imports: rTensor, usedist, dtwclust, clusterSim, clValid, aricode, cluster, ggplot2, Rtsne, uwot, factoextra, ggrepel, cowplot, methods Suggests: knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2024-07-23 DOI: 10.32614/CRAN.package.WormTensor Author: Kentaro Yamamoto [aut, cre], Koki Tsuyuzaki [aut], Itoshi Nikaido [aut] Maintainer: Kentaro Yamamoto <yamaken37.the.answer at gmail.com> BugReports: https://github.com/rikenbit/WormTensor/issues License: MIT + file LICENSE URL: https://github.com/rikenbit/WormTensor NeedsCompilation: no Materials: NEWS CRAN checks: WormTensor results [issues need fixing before 2025-07-23] Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=WormTensor to link to this page.
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