Infer log-linear Poisson Graphical Model with an auxiliary data set. Hot-deck multiple imputation method is used to improve the reliability of the inference with an auxiliary dataset. Standard log-linear Poisson graphical model can also be used for the inference and the Stability Approach for Regularization Selection (StARS) is implemented to drive the selection of the regularization parameter. The method is fully described in <doi:10.1093/bioinformatics/btx819>.
Version: 0.1.5 Depends: R (≥ 3.1.0), ggplot2 Imports: igraph (≥ 1.0), hot.deck, PoiClaClu, glmnet, methods, utils Suggests: knitr, rmarkdown Published: 2024-02-20 DOI: 10.32614/CRAN.package.RNAseqNet Author: Alyssa Imbert [aut], Nathalie Vialaneix [aut, cre] Maintainer: Nathalie Vialaneix <nathalie.vialaneix at inrae.fr> License: GPL (≥ 3) NeedsCompilation: no Citation: RNAseqNet citation info Materials: NEWS In views: MissingData, Omics CRAN checks: RNAseqNet results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=RNAseqNet to link to this page.
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