Provides the ability to create interaction maps, discover CNV map domains (edges), gene annotate interactions, and create interactive visualizations of these CNV interaction maps.
Version: 3.7.2 Depends: R (≥ 4.1.0), ggplot2 Imports: tidyr, reshape2, magrittr, jointseg, shiny, RCurl, foreach, GenomicInteractions, Matrix, OpenImageR, biomaRt, matrixStats, plyr, data.table, dplyr, doParallel, stringr, rtracklayer, Hmisc Suggests: knitr, remotes, pwr, ComplexHeatmap, rmarkdown, HiCseg, igraph, visNetwork, circlize, plotly, InteractionSet, GenomicRanges, GenomicFeatures, IRanges, rslurm, shinythemes, shinycssloaders, DT, logging, heatmaply, S4Vectors, BiocManager, shinyjs, htmltools, htmlwidgets, GenomeInfoDb, BSgenome.Hsapiens.UCSC.hg19, tibble, smoothie Published: 2022-03-30 DOI: 10.32614/CRAN.package.CNVScope Author: James Dalgeish, Yonghong Wang, Jack Zhu, Paul Meltzer Maintainer: James Dalgleish <james.dalgleish at nih.gov> BugReports: https://github.com/jamesdalg/CNVScope/issues/ License: BSD_3_clause + file LICENSE URL: https://github.com/jamesdalg/CNVScope/ NeedsCompilation: no Materials: NEWS CRAN checks: CNVScope results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=CNVScope to link to this page.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4