This is the development version of STexampleData; for the stable release version, see STexampleData.
Collection of spatial transcriptomics datasets in SpatialExperiment Bioconductor formatBioconductor version: Development (3.22)
Collection of spatial transcriptomics datasets stored in SpatialExperiment Bioconductor format, for use in examples, demonstrations, and tutorials. The datasets are from several different platforms and have been sourced from various publicly available sources. Several datasets include images and/or reference annotation labels.
Author: Lukas M. Weber [aut, cre] ORCID: 0000-0002-3282-1730 , Yixing E. Dong [aut] ORCID: 0009-0003-5115-5686
Maintainer: Lukas M. Weber <lmweb012 at gmail.com>
Citation (from within R, entercitation("STexampleData")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("STexampleData")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("STexampleData")
Details See More Suggests BiocStyle, knitr, rmarkdown, BumpyMatrix, HDF5Array Linking To Enhances Depends On Me Imports Me Suggests Me BulkSignalR, escheR, ggsc, ggspavis, nnSVG, poem, smoothclust, spatialSimGP, spoon, SpotSweeper, SVP, tpSVG Links To Me Build Report Build Report Package Archives
Follow Installation instructions to use this package in your R session.
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