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Bioconductor - AffiXcan (development version)

AffiXcan

This is the development version of AffiXcan; for the stable release version, see AffiXcan.

A Functional Approach To Impute Genetically Regulated Expression

Bioconductor version: Development (3.22)

Impute a GReX (Genetically Regulated Expression) for a set of genes in a sample of individuals, using a method based on the Total Binding Affinity (TBA). Statistical models to impute GReX can be trained with a training dataset where the real total expression values are known.

Author: Alessandro Lussana [aut, cre]

Maintainer: Alessandro Lussana <alessandro.lussana at protonmail.com>

Citation (from within R, enter citation("AffiXcan")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("AffiXcan")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AffiXcan")
Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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