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Bioconductor - gDNAinRNAseqData (development version)

This is the development version of gDNAinRNAseqData; for the stable release version, see gDNAinRNAseqData.

Bioconductor version: Development (3.22)

Provides access to BAM files generated from RNA-seq data produced with different levels of gDNA contamination. It currently allows one to download a subset of the data published by Li et al., BMC Genomics, 23:554, 2022. This subset of data is formed by BAM files with about 100,000 alignments with three different levels of gDNA contamination.

Author: Robert Castelo [aut, cre] ORCID: 0000-0003-2229-4508

Maintainer: Robert Castelo <robert.castelo at upf.edu>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("gDNAinRNAseqData")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gDNAinRNAseqData")

Follow Installation instructions to use this package in your R session.

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