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Bioconductor - TENxXeniumData (development version)

This is the development version of TENxXeniumData; for the stable release version, see TENxXeniumData.

Bioconductor version: Development (3.22)

Collection of Xenium spatial transcriptomics datasets provided by 10x Genomics, formatted into the Bioconductor classes, the SpatialExperiment or SpatialFeatureExperiment (SFE), to facilitate seamless integration into various applications, including examples, demonstrations, and tutorials. The constructed data objects include gene expression profiles, per-transcript location data, centroid, segmentation boundaries (e.g., cell or nucleus boundaries), and image.

Author: Matineh Rahmatbakhsh [aut, cre], Monica Ge [aut]

Maintainer: Matineh Rahmatbakhsh <matinerb.94 at gmail.com>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TENxXeniumData")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TENxXeniumData")

Follow Installation instructions to use this package in your R session.

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