This is the development version of LRcellTypeMarkers; for the stable release version, see LRcellTypeMarkers.
Marker gene information for LRcell R Bioconductor packageBioconductor version: Development (3.22)
This is an external ExperimentData package for LRcell. This data package contains the gene enrichment scores calculated from scRNA-seq dataset which indicates the gene enrichment of each cell type in certain brain region. LRcell package is used to identify specific sub-cell types that drives the changes observed in a bulk RNA-seq differential gene expression experiment. For more details, please visit: https://github.com/marvinquiet/LRcell.
Author: Wenjing Ma [cre, aut] ORCID: 0000-0001-8757-651X
Maintainer: Wenjing Ma <wenjing.ma at emory.edu>
Citation (from within R, entercitation("LRcellTypeMarkers")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("LRcellTypeMarkers")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("LRcellTypeMarkers")Follow Installation instructions to use this package in your R session.
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