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Bioconductor - DuoClustering2018 (development version)

DuoClustering2018

This is the development version of DuoClustering2018; for the stable release version, see DuoClustering2018.

Data, Clustering Results and Visualization Functions From Duò et al (2018)

Bioconductor version: Development (3.22)

Preprocessed experimental and simulated scRNA-seq data sets used for evaluation of clustering methods for scRNA-seq data in Duò et al (2018). Also contains results from applying several clustering methods to each of the data sets, and functions for plotting method performance.

Author: Angelo Duò, Charlotte Soneson

Maintainer: Angelo Duò <angelo.duo at icloud.com>

Citation (from within R, enter citation("DuoClustering2018")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("DuoClustering2018")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DuoClustering2018")
Details biocViews ExperimentData, SingleCellData Version 1.27.0 License GPL (>=2) Depends Imports ExperimentHub, utils, magrittr, dplyr, tidyr, mclust, ggplot2, purrr, reshape2, viridis, ggthemes, stats, methods System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.


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