This is the development version of r3Cseq; for the stable release version, see r3Cseq.
Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq)Bioconductor version: Development (3.22)
This package is used for the analysis of long-range chromatin interactions from 3C-seq assay.
Author: Supat Thongjuea, MRC WIMM Centre for Computational Biology, Weatherall Institute of Molecular Medicine, University of Oxford, UK <supat.thongjuea at imm.ox.ac.uk>
Maintainer: Supat Thongjuea <supat.thongjuea at imm.ox.ac.uk> or <supat.thongjuea at gmail.com>
Citation (from within R, entercitation("r3Cseq")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("r3Cseq")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("r3Cseq")Follow Installation instructions to use this package in your R session.
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