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Bioconductor - derfinderHelper (development version)

derfinderHelper

This is the development version of derfinderHelper; for the stable release version, see derfinderHelper.

derfinder helper package

Bioconductor version: Development (3.22)

Helper package for speeding up the derfinder package when using multiple cores. This package is particularly useful when using BiocParallel and it helps reduce the time spent loading the full derfinder package when running the F-statistics calculation in parallel.

Author: Leonardo Collado-Torres [aut, cre] ORCID: 0000-0003-2140-308X , Andrew E. Jaffe [aut] ORCID: 0000-0001-6886-1454 , Jeffrey T. Leek [aut, ths] ORCID: 0000-0002-2873-2671

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Citation (from within R, enter citation("derfinderHelper")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("derfinderHelper")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("derfinderHelper")
Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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