This is the development version of PCAN; for the stable release version, see PCAN.
Phenotype Consensus ANalysis (PCAN)Bioconductor version: Development (3.22)
Phenotypes comparison based on a pathway consensus approach. Assess the relationship between candidate genes and a set of phenotypes based on additional genes related to the candidate (e.g. Pathways or network neighbors).
Author: Matthew Page and Patrice Godard
Maintainer: Matthew Page <matthew.page at ucb.com> and Patrice Godard <patrice.godard at gmail.com>
Citation (from within R, entercitation("PCAN")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("PCAN")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PCAN")
Assessing gene relevance for a set of phenotypes HTML R Script Reference Manual PDF Details See More Package Archives
Follow Installation instructions to use this package in your R session.
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