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Bioconductor - metaMS (development version)

metaMS

This is the development version of metaMS; for the stable release version, see metaMS.

MS-based metabolomics annotation pipeline

Bioconductor version: Development (3.22)

MS-based metabolomics data processing and compound annotation pipeline.

Author: Ron Wehrens [aut] (author of GC-MS part, Initial Maintainer), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline), Yann Guitton [ctb, cre] ORCID: 0000-0002-4479-0636 , Julien Saint-Vanne [ctb]

Maintainer: Yann Guitton <yann.guitton at gmail.com>

Citation (from within R, enter citation("metaMS")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("metaMS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaMS")
Details biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software Version 1.45.0 In Bioconductor since BioC 2.14 (R-3.1) (11 years) License GPL (>= 2) Depends R (>= 4.0), methods, CAMERA, xcms(>= 1.35) Imports Matrix, tools, robustbase, BiocGenerics, graphics, stats, utils System Requirements URL https://github.com/yguitton/metaMS See More Package Archives

Follow Installation instructions to use this package in your R session.

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