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Showing content from https://bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/ldblock.html below:

Bioconductor - ldblock (development version)

ldblock

This is the development version of ldblock; for the stable release version, see ldblock.

data structures for linkage disequilibrium measures in populations

Bioconductor version: Development (3.22)

Define data structures for linkage disequilibrium measures in populations.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ldblock")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ldblock")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ldblock")
ldblock package: linkage disequilibrium data structures HTML R Script Reference Manual PDF NEWS Text Details biocViews Software Version 1.39.0 In Bioconductor since BioC 3.2 (R-3.2) (9.5 years) License Artistic-2.0 Depends R (>= 3.5), methods, rlang Imports BiocGenerics(>= 0.25.1), httr, Matrix System Requirements URL See More Suggests RUnit, knitr, BiocStyle, gwascat, rmarkdown, snpStats, VariantAnnotation, GenomeInfoDb, ensembldb, EnsDb.Hsapiens.v75, Rsamtools, GenomicFiles(>= 1.13.6) Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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