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Bioconductor - hmdbQuery (development version)

hmdbQuery

This is the development version of hmdbQuery; for the stable release version, see hmdbQuery.

utilities for exploration of human metabolome database

Bioconductor version: Development (3.22)

Define utilities for exploration of human metabolome database, including functions to retrieve specific metabolite entries and data snapshots with pairwise associations (metabolite-gene,-protein,-disease).

Author: Vince Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("hmdbQuery")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("hmdbQuery")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("hmdbQuery")
hmdbQuery: working with Human Metabolome Database (hmdb.ca) HTML R Script Reference Manual PDF Details See More Package Archives

Follow Installation instructions to use this package in your R session.


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