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Bioconductor - chromPlot (development version)

chromPlot

This is the development version of chromPlot; for the stable release version, see chromPlot.

Global visualization tool of genomic data

Bioconductor version: Development (3.22)

Package designed to visualize genomic data along the chromosomes, where the vertical chromosomes are sorted by number, with sex chromosomes at the end.

Author: Ricardo A. Verdugo and Karen Y. Orostica

Maintainer: Karen Y. Orostica <korostica09 at gmail.com>

Citation (from within R, enter citation("chromPlot")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("chromPlot")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chromPlot")
Details biocViews Annotation, DataRepresentation, FunctionalGenomics, Genetics, Sequencing, Software, Visualization Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL (>= 2) Depends stats, utils, graphics, grDevices, datasets, base, biomaRt, GenomicRanges, R (>= 3.1.0) Imports System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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