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Showing content from https://bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/TPP2D.html below:

Bioconductor - TPP2D (development version)

TPP2D

This is the development version of TPP2D; for the stable release version, see TPP2D.

Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)

Bioconductor version: Development (3.22)

Detection of ligand-protein interactions from 2D thermal profiles (DLPTP), Performs an FDR-controlled analysis of 2D-TPP experiments by functional analysis of dose-response curves across temperatures.

Author: Nils Kurzawa [aut, cre], Holger Franken [aut], Simon Anders [aut], Wolfgang Huber [aut], Mikhail M. Savitski [aut]

Maintainer: Nils Kurzawa <nilskurzawa at gmail.com>

Citation (from within R, enter citation("TPP2D")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TPP2D")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TPP2D")
Details biocViews DataImport, Proteomics, Software Version 1.25.0 In Bioconductor since BioC 3.9 (R-3.6) (6 years) License GPL-3 Depends R (>= 3.6.0), stats, utils, dplyr, methods Imports ggplot2, tidyr, foreach, doParallel, openxlsx, stringr, RCurl, parallel, MASS, BiocParallel, limma System Requirements URL http://bioconductor.org/packages/TPP2D Bug Reports https://support.bioconductor.org/ See More Package Archives

Follow Installation instructions to use this package in your R session.


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