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Showing content from https://bioconductor.org/packages/devel/bioc/html/../../bioc/html/../../bioc/html/OmicsMLRepoR.html below:

Bioconductor - OmicsMLRepoR (development version)

OmicsMLRepoR

This is the development version of OmicsMLRepoR; for the stable release version, see OmicsMLRepoR.

Search harmonized metadata created under the OmicsMLRepo project

Bioconductor version: Development (3.22)

This package provides functions to browse the harmonized metadata for large omics databases. This package also supports data navigation if the metadata incorporates ontology.

Author: Sehyun Oh [aut, cre] ORCID: 0000-0002-9490-3061 , Kaelyn Long [aut]

Maintainer: Sehyun Oh <shbrief at gmail.com>

Citation (from within R, enter citation("OmicsMLRepoR")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("OmicsMLRepoR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OmicsMLRepoR")
Details biocViews DataRepresentation, Infrastructure, Software Version 1.3.1 In Bioconductor since BioC 3.20 (R-4.4) (0.5 years) License Artistic-2.0 Depends R (>= 4.4.0) Imports dplyr, stringr, rols, tidyr, methods, stats, tibble, data.tree, jsonlite, plyr, BiocFileCache, readr, DiagrammeR, rlang, lubridate System Requirements URL https://github.com/shbrief/OmicsMLRepoR Bug Reports https://github.com/shbrief/OmicsMLRepoR/issues See More Package Archives

Follow Installation instructions to use this package in your R session.


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