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Bioconductor - GMRP (development version)

GMRP

This is the development version of GMRP; for the stable release version, see GMRP.

GWAS-based Mendelian Randomization and Path Analyses

Bioconductor version: Development (3.22)

Perform Mendelian randomization analysis of multiple SNPs to determine risk factors causing disease of study and to exclude confounding variabels and perform path analysis to construct path of risk factors to the disease.

Author: Yuan-De Tan

Maintainer: Yuan-De Tan <tanyuande at gmail.com>

Citation (from within R, enter citation("GMRP")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("GMRP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GMRP")
Causal Effect Analysis of Risk Factors for Disease with the "GMRP" package PDF R Script GMRP-manual.pdf PDF Reference Manual PDF Details biocViews Regression, SNP, Sequencing, Software Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License GPL (>= 2) Depends R (>= 3.3.0), stats, utils, graphics, grDevices, diagram, plotrix, base, GenomicRanges Imports System Requirements URL See More Package Archives

Follow Installation instructions to use this package in your R session.

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