This is the development version of GDSArray; for the stable release version, see GDSArray.
Representing GDS files as array-like objectsBioconductor version: Development (3.22)
GDS files are widely used to represent genotyping or sequence data. The GDSArray package implements the `GDSArray` class to represent nodes in GDS files in a matrix-like representation that allows easy manipulation (e.g., subsetting, mathematical transformation) in _R_. The data remains on disk until needed, so that very large files can be processed.
Author: Qian Liu [aut], Martin Morgan [aut], Hervé Pagès [aut], Xiuwen Zheng [aut, cre]
Maintainer: Xiuwen Zheng <zhengx at u.washington.edu>
Citation (from within R, entercitation("GDSArray")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GDSArray")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GDSArray")Follow Installation instructions to use this package in your R session.
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