This is the development version of GA4GHclient; for the stable release version, see GA4GHclient.
A Bioconductor package for accessing GA4GH API data serversBioconductor version: Development (3.22)
GA4GHclient provides an easy way to access public data servers through Global Alliance for Genomics and Health (GA4GH) genomics API. It provides low-level access to GA4GH API and translates response data into Bioconductor-based class objects.
Author: Welliton Souza [aut, cre], Benilton Carvalho [ctb], Cristiane Rocha [ctb]
Maintainer: Welliton Souza <well309 at gmail.com>
Citation (from within R, entercitation("GA4GHclient")
): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("GA4GHclient")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GA4GHclient")
Details biocViews DataRepresentation, Software, ThirdPartyClient Version 1.33.0 In Bioconductor since BioC 3.5 (R-3.4) (8 years) License GPL (>= 2) Depends R (>= 3.5.0), S4Vectors Imports BiocGenerics, Biostrings, dplyr, GenomeInfoDb, GenomicRanges, httr, IRanges, jsonlite, methods, VariantAnnotation System Requirements URL https://github.com/labbcb/GA4GHclient Bug Reports https://github.com/labbcb/GA4GHclient/issues See More Package Archives
Follow Installation instructions to use this package in your R session.
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