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Bioconductor - BAGS (development version)

BAGS

This is the development version of BAGS; for the stable release version, see BAGS.

A Bayesian Approach for Geneset Selection

Bioconductor version: Development (3.22)

R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.

Author: Alejandro Quiroz-Zarate

Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>

Citation (from within R, enter citation("BAGS")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BAGS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BAGS")
BAGS: A Bayesian Approach for Geneset Selection. PDF R Script Reference Manual PDF NEWS Text Details biocViews Bayesian, Software Version 2.49.0 In Bioconductor since BioC 2.13 (R-3.0) (11.5 years) License Artistic-2.0 Depends R (>= 2.10), breastCancerVDX, Biobase Imports System Requirements URL See More Suggests Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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