This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see RLHub.
An ExperimentHub package for accessing processed RLSuite data setsBioconductor version: 3.16
| RLHub provides a convenient interface to the processed data provided within RLSuite, a tool-chain for analyzing R-loop-mapping data sets. The primary purpose of RLHub is to serve the processed data sets required by the RLSeq R package and the RLBase web service. Additionally, RLHub provides a stand-alone R interface to these data, benefiting users who are addressing questions related to R-loop regions (RL-Regions), R-loop-binding proteins (RLBPs), R-loop co-localizing factors, and the differences between R-loop-mapping methods. The full data-generating protocol is found here: https://github.com/Bishop-Laboratory/RLBase-data.
Author: Henry Miller [aut, cre, cph] , Alexander Bishop [ths, cph]
Maintainer: Henry Miller <millerh1 at uthscsa.edu>
Citation (from within R, entercitation("RLHub")): Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RLHub")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RLHub")Follow Installation instructions to use this package in your R session.
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