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Bioconductor - ProteomicsAnnotationHubData

ProteomicsAnnotationHubData

This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ProteomicsAnnotationHubData .

Transform public proteomics data resources into Bioconductor Data Structures

Bioconductor version: 3.14

These recipes convert a variety and a growing number of public proteomics data sets into easily-used standard Bioconductor data structures.

Author: Gatto Laurent [aut, cre], Sonali Arora [aut]

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Citation (from within R, enter citation("ProteomicsAnnotationHubData")): Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ProteomicsAnnotationHubData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProteomicsAnnotationHubData")

Details biocViews DataImport, Proteomics, Software Version 1.24.0 In Bioconductor since BioC 3.2 (R-3.2) (8.5 years) License Artistic-2.0 Depends AnnotationHub(>= 2.1.45), AnnotationHubData Imports mzR(>= 2.3.2), MSnbase, Biostrings, GenomeInfoDb, utils, Biobase, BiocManager, RCurl System Requirements URL https://github.com/lgatto/ProteomicsAnnotationHubData Bug Reports https://github.com/lgatto/ProteomicsAnnotationHubData/issues See More Suggests knitr, BiocStyle, rmarkdown, testthat Linking To Enhances Depends On Me Imports Me Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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