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Bioconductor - waveTiling

waveTiling

This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see waveTiling.

Wavelet-Based Models for Tiling Array Transcriptome Analysis

Bioconductor version: 3.10

This package is designed to conduct transcriptome analysis for tiling arrays based on fast wavelet-based functional models.

Author: Kristof De Beuf <kristof.debeuf at UGent.be>, Peter Pipelers <peter.pipelers at ugent.be> and Lieven Clement <lieven.clement at gmail.com>

Maintainer: Kristof De Beuf <kristof.debeuf at UGent.be>

Citation (from within R, enter citation("waveTiling")): Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("waveTiling")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("waveTiling")
Details biocViews DifferentialExpression, GeneExpression, Microarray, Software, TimeCourse Version 1.28.0 In Bioconductor since BioC 2.11 (R-2.15) (11.5 years) License GPL (>=2) Depends oligo, oligoClasses, Biobase, Biostrings, GenomeGraphs Imports methods, affy, preprocessCore, GenomicRanges, waveslim, IRanges System Requirements URL https://r-forge.r-project.org/projects/wavetiling/ See More Package Archives

Follow Installation instructions to use this package in your R session.

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