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NCBI C++ ToolKit: src/objtools/flatfile/xutils.cpp Source File

(

& loc : locs) {

*

= loc->GetId();

->SetLiteral().SetFuzz().SetLim();

->SetLoc().Assign(*loc);

deltas.push_back(

);

days[12] = { 31, 28, 31, 30, 31, 30, 31, 31, 30, 31, 30, 31 };

= days[month - 1];

((month == 2) && (year % 4 == 0) && (year != 2000)) {

User-defined methods of the data storage class.

User-defined methods of the data storage class.

std::list< CRef< objects::CDelta_seq > > TDeltaList

static DLIST_TYPE *DLIST_NAME() last(DLIST_LIST_TYPE *list)

const CSeq_id * GetId(void) const

Get the id of the location return NULL if has multiple ids or no id at all.

uint8_t Uint1

1-byte (8-bit) unsigned integer

int16_t Int2

2-byte (16-bit) signed integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

bool IsSetDb(void) const

name of database or system Check if a value has been assigned to Db data member.

bool IsSetYear(void) const

full year (including 1900) Check if a value has been assigned to Year data member.

const TTag & GetTag(void) const

Get the Tag member data.

bool IsSetTag(void) const

appropriate tag Check if a value has been assigned to Tag data member.

const TDb & GetDb(void) const

Get the Db member data.

bool IsSetDay(void) const

day of month (1-31) Check if a value has been assigned to Day data member.

bool IsSetMonth(void) const

month (1-12) Check if a value has been assigned to Month data member.

TYear GetYear(void) const

Get the Year member data.

TMonth GetMonth(void) const

Get the Month member data.

TDay GetDay(void) const

Get the Day member data.

TId GetId(void) const

Get the variant data.

TFrom GetFrom(void) const

Get the From member data.

bool IsGeneral(void) const

Check if variant General is selected.

const TGeneral & GetGeneral(void) const

Get the variant data.

TTo GetTo(void) const

Get the To member data.

std::list< SeqLoc > TSeqLocList

Int4 delta(size_t dimension_, const Int4 *score_)

const char * unkseqlitdbtag

void XGappedSeqLocsToDeltaSeqs(const TSeqLocList &locs, TDeltaList &deltas)

static bool XISAGappedSeqLoc(const CSeq_loc &loc)

int XDateCheck(const CDate_std &date)

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