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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/url__tooltip__handler_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/seq_graphic/url_tooltip_handler.cpp Source File

40 #include <wx/msgdlg.h> 58  size_t

namePos = href.find(name);

59  if

(string::npos == namePos)

61  size_t

nextPos = href.find(

'&'

, namePos);

62  if

(string::npos == nextPos)

63

nextPos = href.length();

64  return

href.substr(namePos + name.length() + 1, nextPos - namePos - name.length() - 1);

69  const string

unalignedRegionHref =

"$UNALIGNED_REGION$"

;

70  const string

genomicLinkHref =

"$GENOMIC_LINK$"

;

71  if

(string::npos != href.find(unalignedRegionHref)) {

75  else if

(string::npos != href.find(genomicLinkHref)) {

96  if

(

"true"

==

value

)

98  bool

reverse(

false

);

100  if

(

"true"

==

value

)

104  if

(

"true"

==

value

)

122  type

->SetStr(

"GraphicalViewParams"

);

130  label

->SetStr(

"Settings"

);

133

param->

SetData

().SetStr(url);

134  data

.push_back(param);

143  string

tmp_seq{ seq };

151  if

(!flipped_strands) {

157  if

(!is_protein && flipped_strands) {

176

wxMessageBox(

"Failed to retrieve sequence: "

+ seq_id);

183  if

(reverse != flipped_strands) {

191

dialogUnalignedRegion.SetTitle(dialogUnalignedRegion.GetTitle() +

" - poly(A)-tail"

);

193

dialogUnalignedRegion.ShowModal();

198  size_t

hiddenBasesCount(0);

208  if

(hiddenBasesCount) {

211

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

215

wxString hiddenBasesText;

216

hiddenBasesText.Printf(

"\n...(%ld more unaligned bases)...\n"

, (

long

)hiddenBasesCount);

222

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

227

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

235

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

240

displayFrom = (from -

offset

) > 0 ? (from -

offset

) : 0;

242

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

246  if

(hiddenBasesCount) {

250

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

254

wxString hiddenBasesText;

255

hiddenBasesText.Printf(

"\n...(%ld more unaligned bases)...\n"

, (

long

)hiddenBasesCount);

261

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

269

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

278  size_t

hiddenBasesCount(0);

289

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

293  if

(hiddenBasesCount) {

297

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

301

wxString hiddenBasesText;

302

hiddenBasesText.Printf(

"\n...(%ld more unaligned bases)...\n"

, (

long

)hiddenBasesCount);

308

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

316

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

323  if

(hiddenBasesCount) {

327

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

331

wxString hiddenBasesText;

332

hiddenBasesText.Printf(

"\n...(%ld more unaligned bases)...\n"

, (

long

)hiddenBasesCount);

338

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

346

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

351

displayFrom = (from -

offset

) > 0 ? (from -

offset

) : 0;

354

vec.

GetSeqData

(displayFrom, displayTo, seq_data);

363

vector<string> params;

365  for

(

auto

& param : params) {

366  size_t

pos = param.find(

"mk="

);

367  if

(string::npos == pos)

370

vector<string> marker;

373  if

(3 != marker.size())

376  TSeqPos

mpos = NStr::StringToNumeric<TSeqPos>(marker[0]);

379

param += NStr::NumericToString<TSeqPos>(--mpos);

388  if

(0 == params.size())

393  for

(

size_t i

= 1;

i

< params.size(); ++

i

) {

static SIZE_TYPE Reverse(const string &src, TCoding src_coding, TSeqPos pos, TSeqPos length, string &dst)

static SIZE_TYPE ReverseComplement(const string &src, TCoding src_coding, TSeqPos pos, TSeqPos length, string &dst)

void WriteNormalText(const wxString &text)

void WriteRedText(const wxString &text)

unsigned int TSeqPos

Type for sequence locations and lengths.

int TSignedSeqPos

Type for signed sequence position.

#define LOG_POST(message)

This macro is deprecated and it's strongly recomended to move in all projects (except tests) to macro...

void Error(CExceptionArgs_Base &args)

virtual bool Send(CEvent *evt, EDispatch disp_how=eDispatch_Default, int pool_name=ePool_Default)

Sends an event synchronously.

@ eDispatch_Default

dispatch until handled at least by one handler

CSeq_id & Set(const CTempString &the_id, TParseFlags flags=fParse_AnyRaw)

Reassign based on flat specifications; arguments interpreted as with constructors.

@ eCoding_Iupac

Set coding to printable coding (Iupacna or Iupacaa)

void GetSeqData(TSeqPos start, TSeqPos stop, string &buffer) const

Fill the buffer string with the sequence data for the interval [start, stop).

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static list< string > & Split(const CTempString str, const CTempString delim, list< string > &arr, TSplitFlags flags=0, vector< SIZE_TYPE > *token_pos=NULL)

Split a string using specified delimiters.

static unsigned int StringToUInt(const CTempString str, TStringToNumFlags flags=0, int base=10)

Convert string to unsigned int.

@ fConvErr_NoThrow

Do not throw an exception on error.

static const char label[]

TData & SetData(void)

Assign a value to Data data member.

void SetLabel(TLabel &value)

Assign a value to Label data member.

void SetType(TType &value)

Assign a value to Type data member.

void SetData(TData &value)

Assign a value to Data data member.

vector< CRef< CUser_field > > TData

const GenericPointer< typename T::ValueType > T2 value

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