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NCBI C++ ToolKit: include/objmgr/tse_handle.hpp Source File

OrderedBefore(

& tse)

;

GetBlobId(

)

;

GetUsedMemory(

)

;

Blob_IsSuppressed(

)

;

Blob_IsSuppressedTemp(

)

;

Blob_IsSuppressedPerm(

)

;

Blob_IsDead(

)

;

ETopLevelObjectType GetTopLevelObjectType()

;

IsTopLevelSeq_submit()

;

& GetTopLevelSeq_submit()

;

CanBeEdited(

)

;

& x_GetTSE_Info(

)

;

!ids || ids->empty();

->AddInfoLock();

->RemoveInfoLock();

<

Info>

*

(base);

*

(base);

CScope_Impl * GetImpl(void) const

void Swap(CHeapScope &scope)

CScope & GetScope(void) const

void Lock(CScopeInfo_Base *info) const

void Relock(CScopeInfo_Base *info) const

void Unlock(CScopeInfo_Base *info) const

CRef< CObject > m_DetachedInfo

CConstRef< CObject > m_ObjectInfo

CTSE_ScopeInfo * m_TSE_ScopeInfo

void RemoveInfoLock(void)

void operator=(const CScopeInfo_Base &)

bool IsDetached(void) const

bool IsTemporary(void) const

void x_SetTSE_Lock(const CTSE_ScopeUserLock &tse, const CTSE_Info_Object &info)

void x_SetTSE_Handle(const CTSE_Handle &tse)

const CTSE_Handle & GetTSE_Handle(void) const

atomic< bool > m_TSE_HandleAssigned

virtual void x_DetachTSE(CTSE_ScopeInfo *tse)

bool IsAttached(void) const

virtual const TIndexIds * GetIndexIds(void) const

CScope_Impl & x_GetScopeImpl(void) const

CTSE_ScopeInfo & x_GetTSE_ScopeInfo(void) const

CScopeInfo_Base(const CScopeInfo_Base &)

bool HasObject(const CTSE_Info_Object &info) const

atomic< bool > m_ObjectInfoAssigned

vector< TIndexId > TIndexIds

virtual void x_AttachTSE(CTSE_ScopeInfo *tse)

void x_ResetTSE_Lock(void)

const CTSE_Info_Object & GetObjectInfo_Base(void) const

bool HasObject(void) const

atomic< Uint8 > m_LockCounter

bool IsRemoved(void) const

CScopeInfo_RefBase(CScopeInfo_Base *info)

TScopeInfo * operator->(void)

void Reset(TScopeInfo *info)

const TScopeInfo * operator->(void) const

TScopeInfo & operator*(void)

const TScopeInfo & operator*(void) const

static const TScopeInfo * toInfo(const CScopeInfo_Base *base)

static CScopeInfo_Base * toBase(TScopeInfo *info)

CScopeInfo_Ref(TScopeInfo &info)

TScopeInfo & GetNCObject(void) const

static TScopeInfo * toInfo(CScopeInfo_Base *base)

int TFeatureIdInt

Find features by an integer FeatId.

ETopLevelObjectType

Type of top level object added to scope.

CBlobIdKey TBlobId

TSE info getters.

CConstRef< CSeq_entry > GetCompleteTSE(void) const

Complete and get const reference to the seq-entry.

bool operator<(const CTSE_Handle &tse) const

CTSE_ScopeInfo TScopeInfo

vector< CAnnotObject_Info * > TAnnotObjectList

CConstRef< CSeq_entry > GetTSECore(void) const

Get const reference to the seq-entry.

bool operator==(const CTSE_Handle &tse) const

CSeq_entry TObject

Unified interface for templates.

CScope_Impl & x_GetScopeImpl(void) const

vector< CSeq_feat_Handle > TSeq_feat_Handles

string TFeatureIdStr

Find features by a string FeatId.

CObject_id TFeatureId

Find features by CObject_id (string or integer)

CConstRef< TObject > GetCompleteObject(void) const

void Swap(CTSE_Handle &tse)

bool operator!=(const CTSE_Handle &tse) const

CConstRef< TObject > GetObjectCore(void) const

TScopeInfo & x_GetScopeInfo(void) const

DECLARE_OPERATOR_BOOL(IsValid())

CTSE_Handle(void)

Default constructor/destructor and assignment.

CScope & GetScope(void) const

Returns scope.

bool operator<(const CEquivRange &A, const CEquivRange &B)

bool operator==(const CEquivRange &A, const CEquivRange &B)

void Info(CExceptionArgs_Base &args)

bool IsValid(const CSeq_point &pt, CScope *scope)

Checks that point >= 0 and point < length of Bioseq.

TObjectType * GetNonNullPointer(void)

Get pointer value and throw a null pointer exception if pointer is null.

bool NotNull(void) const THROWS_NONE

Check if pointer is not null – same effect as NotEmpty().

TObjectType * GetNonNullNCPointer(void) const

Get pointer value and throw a null pointer exception if pointer is null.

void Reset(void)

Reset reference object.

void Swap(TThisType &ref)

Swaps the pointer with another reference.

void Unlock(const CObject *object) const

void Lock(const CObject *object) const

TObjectType * GetPointerOrNull(void) THROWS_NONE

Get pointer value.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

bool operator!=(const CNCBI_IPAddr &lhs, unsigned int rhs)

#define NCBI_XOBJMGR_EXPORT

E_Choice

Choice variants.

void Swap(T &a, T &b) RAPIDJSON_NOEXCEPT

Custom swap() to avoid dependency on C++ <algorithm> header.

Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.

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