Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/trna__from__gene_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/trna_from_gene.cpp Source File

(parent,

, caption, pos,

, style);

( wxWindow* parent, wxWindowID

,

wxString& caption,

wxPoint& pos,

wxSize&

,

style )

SetExtraStyle(wxWS_EX_BLOCK_EVENTS);

GetSizer()->SetSizeHints(

);

wxBoxSizer* itemBoxSizer2 =

wxBoxSizer(wxVERTICAL);

itemCBulkCmdDlg1->SetSizer(itemBoxSizer2);

wxArrayString feat_strings;

feat_strings.Add(

(

));

feat_strings.Add(

(

));

=

wxChoice( itemCBulkCmdDlg1,

, wxDefaultPosition, wxDefaultSize, feat_strings, 0 );

itemBoxSizer2->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

wxStaticBox* itemStaticBoxSizer7Static =

wxStaticBox(itemCBulkCmdDlg1,

,

(

));

wxStaticBoxSizer* itemBoxSizer7 =

wxStaticBoxSizer(itemStaticBoxSizer7Static, wxVERTICAL);

itemBoxSizer2->Add(itemBoxSizer7, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

wxBoxSizer* itemBoxSizer8 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer7->Add(itemBoxSizer8, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

wxStaticText* stattext2 =

wxStaticText(

, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer8->Add(stattext2, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxArrayString choice_strings;

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

choice_strings.Add(

(

));

=

wxChoice(

,

, wxDefaultPosition, wxDefaultSize, choice_strings, 0 );

itemBoxSizer8->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxCheckBox( itemCBulkCmdDlg1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer8->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxBoxSizer* itemBoxSizer9 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer7->Add(itemBoxSizer9, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

=

wxStaticText(

, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer9->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxChoice(

,

, wxDefaultPosition, wxDefaultSize, choice_strings, 0 );

itemBoxSizer9->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxCheckBox( itemCBulkCmdDlg1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer9->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxBoxSizer* itemBoxSizer10 =

wxBoxSizer(wxHORIZONTAL);

itemBoxSizer7->Add(itemBoxSizer10, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

=

wxStaticText(

, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer10->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxChoice(

,

, wxDefaultPosition, wxDefaultSize, choice_strings, 0 );

itemBoxSizer10->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxCheckBox( itemCBulkCmdDlg1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer10->Add(

, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxStaticText* stattext4 =

wxStaticText(

, wxID_STATIC,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer2->Add(stattext4, 0, wxALIGN_CENTER_HORIZONTAL|wxALIGN_CENTER_VERTICAL|wxALL, 5);

=

wxTextCtrl( itemCBulkCmdDlg1,

, wxEmptyString, wxDefaultPosition, wxSize(100, -1), 0 );

itemBoxSizer2->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxLEFT|wxRIGHT|wxBOTTOM, 5);

=

wxCheckBox( itemCBulkCmdDlg1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

itemBoxSizer2->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

itemBoxSizer2->Add(

, 0, wxALIGN_CENTER_HORIZONTAL|wxALL, 5);

(sel_feat != wxNOT_FOUND)

feat_type =

->GetString(sel_feat).ToStdString();

vector<CConstRef<CObject> > objs;

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

any_change =

;

features[bsh].push_back(

);

(

&bsh_pair : features)

(

= 0;

< bsh_pair.second.size();

++)

loc->

(

->GetLocation());

(

j = 1; j < bsh_pair.second.size(); j++)

* f2 = bsh_pair.second[j];

(feat_type ==

)

(

->IsSetProduct())

new_feat->

().SetRna().SetRnaProductName(name, remainder);

wxMessageBox(

(

),

(

),

wxOK | wxICON_ERROR,

);

(sel1 != wxNOT_FOUND && sel1 != 0)

(sel2 != wxNOT_FOUND && sel2 != 0)

(

->GetSelection() != wxNOT_FOUND)

name +=

->GetValue().ToStdString();

gene.

().SetGene().ResetLocus();

gene.

().SetGene().ResetLocus_tag();

gene.

().SetGene().ResetAllele();

gene.

().SetGene().ResetDesc();

gene.

().SetGene().ResetMaploc();

gene.

().SetGene().SetSyn().erase(gene.

().SetGene().SetSyn().begin());

gene.

().SetGene().ResetSyn();

(sel_str ==

(

))

wxSizerItemList& slist = sizer->GetChildren();

(wxSizerItemList::iterator iter = slist.begin(); iter != slist.end(); ++iter, ++

) {

((*iter)->IsSizer()) {

}

((*iter)->IsWindow()) {

wxWindow* child = (*iter)->GetWindow();

wxSizer* subsizer = child->GetSizer();

@ eExtreme_Positional

numerical value

@ eExtreme_Biological

5' and 3'

objects::CSeq_entry_Handle m_TopSeqEntry

bool Create(wxWindow *parent, wxWindowID id, const wxString &title, const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxDefaultSize, long style=wxDEFAULT_FRAME_STYLE, const wxString &name=wxFrameNameStr)

bool GetTopLevelSeqEntryAndProcessor()

objects::ECapChange GetCapitalizationRequest()

void PopulateFeatureListbox(void)

virtual string GetFieldName(const bool subfield=false)

Returns the name of the field as selected in the panel.

void ListPresentFeaturesFirst(const objects::CSeq_entry_Handle &entry, vector< const objects::CFeatListItem * > *featlist=nullptr)

vector< CConstRef< CObject > > GetObjects(objects::CBioseq_Handle bsh)

namespace ncbi::objects::

const string & GetNamedQual(const CTempString &qual_name) const

Return a named qualifier.

void RemoveQualifier(const string &qual_name)

Remove all qualifiers with the given name; do nothing if no such qualifier exists.

CRef< edit::CStringConstraint > GetStringConstraint()

CStringConstraintPanel * m_StringConstraintPanel

string GetSuggestedName(CSeq_feat &feat, CRef< CSeq_feat > prot_feat, CSeq_entry_Handle seh)

static bool ShowToolTips()

Should we show tooltips?

virtual string GetErrorMessage()

virtual CRef< CCmdComposite > GetCommand()

void GetNameFromGene(CSeq_feat &gene, const wxString &sel_str, bool remove, string &name)

wxStaticText * m_3rdChoice

CtRNAFromGene()

Constructors.

CCapChangePanel * m_CapChangeOptions

bool Create(wxWindow *parent, wxWindowID id=wxID_ANY, const wxString &caption=_("tRNA/rRNA From Gene"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(900, 500), long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxCLOSE_BOX|wxTAB_TRAVERSAL)

Creation.

void ProcessUpdateFeatEvent(wxCommandEvent &event)

void OnSelectFeatQual(wxCommandEvent &event)

~CtRNAFromGene()

Destructor.

void CreateControls()

Creates the controls and sizers.

void Init()

Initialises member variables.

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

COkCancelPanel * m_OkCancel

wxCheckBox * m_SingleInterval

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void UpdateChildrenFeaturePanels(wxSizer *sizer)

CFeatureFieldNamePanel * m_FeatureConstraint

wxStaticText * m_2ndChoice

IWorkbench is the central interface in the application framework.

static auto & FixCapitalizationInString

const string kPartialStart

#define EVT_UPDATE_FEATURE_LIST(id, fn)

static void DLIST_NAME() remove(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

static const char * str(char *buf, int n)

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

bool IsPartialStart(ESeqLocExtremes ext) const

check start or stop of location for e_Lim fuzz

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Override Assign() to incorporate cache invalidation.

void SetPartialStart(bool val, ESeqLocExtremes ext)

set / remove e_Lim fuzz on start or stop (lt/gt - indicating partial interval)

void SetPartialStop(bool val, ESeqLocExtremes ext)

bool IsPartialStop(ESeqLocExtremes ext) const

CRef< CSeq_loc > Seq_loc_Add(const CSeq_loc &loc1, const CSeq_loc &loc2, CSeq_loc::TOpFlags flags, CScope *scope)

Add two seq-locs.

CBioseq_Handle GetBioseqHandle(const CSeq_id &id)

Get bioseq handle by seq-id.

CSeq_feat_Handle GetSeq_featHandle(const CSeq_feat &feat, EMissing action=eMissing_Default)

CSeq_entry_Handle GetSeq_entry_Handle(void) const

Get parent Seq-entry handle.

const CSeq_feat & GetOriginalFeature(void) const

Get original feature with unmapped location/product.

const CSeq_feat_Handle & GetSeq_feat_Handle(void) const

Get original feature handle.

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static bool IsBlank(const CTempString str, SIZE_TYPE pos=0)

Check if a string is blank (has no text).

bool IsSetSyn(void) const

synonyms for locus Check if a value has been assigned to Syn data member.

const TSyn & GetSyn(void) const

Get the Syn member data.

const TDesc & GetDesc(void) const

Get the Desc member data.

bool IsSetLocus_tag(void) const

systematic gene name (e.g., MI0001, ORF0069) Check if a value has been assigned to Locus_tag data mem...

bool IsSetLocus(void) const

Official gene symbol Check if a value has been assigned to Locus data member.

bool IsSetDesc(void) const

descriptive name Check if a value has been assigned to Desc data member.

bool IsSetAllele(void) const

Official allele designation Check if a value has been assigned to Allele data member.

bool IsSetMaploc(void) const

descriptive map location Check if a value has been assigned to Maploc data member.

const TLocus_tag & GetLocus_tag(void) const

Get the Locus_tag member data.

const TLocus & GetLocus(void) const

Get the Locus member data.

const TAllele & GetAllele(void) const

Get the Allele member data.

const TMaploc & GetMaploc(void) const

Get the Maploc member data.

bool IsSetComment(void) const

Check if a value has been assigned to Comment data member.

bool IsSetData(void) const

the specific data Check if a value has been assigned to Data data member.

void SetLocation(TLocation &value)

Assign a value to Location data member.

void SetComment(const TComment &value)

Assign a value to Comment data member.

void SetPartial(TPartial value)

Assign a value to Partial data member.

const TLocation & GetLocation(void) const

Get the Location member data.

bool IsGene(void) const

Check if variant Gene is selected.

const TData & GetData(void) const

Get the Data member data.

void SetData(TData &value)

Assign a value to Data data member.

void ResetComment(void)

Reset Comment data member.

const TComment & GetComment(void) const

Get the Comment member data.

const TGene & GetGene(void) const

Get the variant data.

const struct ncbi::grid::netcache::search::fields::SIZE size

USING_SCOPE(ncbi::objects)

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4