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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/timing_8hpp_source.html below:

NCBI C++ ToolKit: src/app/pubseq_gateway/server/timing.hpp Source File

1 #ifndef PUBSEQ_GATEWAY_TIMING__HPP 2 #define PUBSEQ_GATEWAY_TIMING__HPP 123 const string

& description,

140

m_PSGTiming->Add(mks);

141

m_AvgTimeSeries.Add(mks);

142 if

(mks > m_MaxValue)

149

m_PSGTiming->Reset();

150

m_AvgTimeSeries.Reset();

156

m_PSGTiming->Rotate();

169

m_AvgTimeSeries.Rotate();

178 return

m_PSGTiming->GetCurrentTick() + 1;

184 virtual CJsonNode

SerializeCombined(

int

most_ancient_time,

185 int

most_recent_time,

186 unsigned long

tick_span,

188 const string

& description)

const

;

189 virtual CJsonNode

SerializeSeries(

int

most_ancient_time,

190 int

most_recent_time,

191 unsigned long

tick_span,

193 const string

& description)

const

;

195 int

most_ancient_time,

196 int

most_recent_time,

198 size_t

current_index)

200 return

m_AvgTimeSeries.Serialize(time_series,

203

loop, current_index);

218 #define TIMING_CLASS(class_name) \ 219 class class_name : public CPSGTimingBase \ 222 class_name(unsigned long min_stat_value, \ 223 unsigned long max_stat_value, \ 224 unsigned long n_bins, \ 225 TOnePSGTiming::EScaleType stat_type, \ 226 bool & reset_to_default); \ 298 unsigned long

max_blob_size,

299 unsigned long

min_stat_value,

300 unsigned long

max_stat_value,

301 unsigned long

n_bins,

303 bool

& reset_to_default);

307 virtual CJsonNode

SerializeCombined(

int

most_ancient_time,

308 int

most_recent_time,

309 unsigned long

tick_span,

311 const string

& description)

const

;

312 virtual CJsonNode

SerializeSeries(

int

most_ancient_time,

313 int

most_recent_time,

314 unsigned long

tick_span,

316 const string

& description)

const

;

319

{

return

m_MinBlobSize; }

322

{

return

m_MaxBlobSize; }

335 unsigned long

max_stat_value,

336 unsigned long

n_bins,

337 const string

& stat_type,

338 unsigned long

small_blob_size,

339 const string

& only_for_processor,

340 size_t

log_timing_threshold,

361 void

RotateRequestStat(

void

);

362 void

RotateAvgPerfTimeSeries(

void

);

363 void

CollectMomentousStat(

size_t

tcp_conn_count,

364 size_t

active_request_count,

365 size_t

backlog_count);

368 int

most_recent_time,

369 const

vector<CTempString> & histogram_names,

370 const

vector<pair<int, int>> & time_series,

371 unsigned long

tick_span)

const

;

374 bool

x_SetupBlobSizeBins(

unsigned long

min_stat_value,

375 unsigned long

max_stat_value,

376 unsigned long

n_bins,

378 unsigned long

small_blob_size);

379 ssize_t

x_GetBlobRetrievalBinIndex(

unsigned long

blob_size);

380 void

x_UpdateMaxReqsStat(

size_t

index,

457 const string

& name,

const string

& description) :

458

m_Timing(timing), m_Name(name), m_Description(description),

463 const string

& name,

const string

& description,

465 const string

& counter_id,

466 const string

& counter_name,

467 const string

& counter_description) :

468

m_Timing(timing), m_Name(name), m_Description(description),

470

m_CounterId(counter_id),

471

m_CounterName(counter_name),

472

m_CounterDescription(counter_description)

unsigned long GetMaxBlobSize(void) const

unsigned long m_MinBlobSize

unsigned long m_MaxBlobSize

unsigned long GetMinBlobSize(void) const

A series of same-structured histograms covering logarithmically (base 2) increasing time periods....

CHistogram â collect the distribution of the numerical data samples.

CMomentousCounterSeries m_BacklogStat

CMomentousCounterSeries m_TCPConnectionsStat

unique_ptr< CMyNCBITiming > m_RetrieveMyNCBIErrorTiming

vector< unique_ptr< CResolutionTiming > > m_ResolutionFoundTiming

vector< vector< unique_ptr< CBlobRetrieveTiming > > > m_BlobRetrieveTiming

vector< vector< unique_ptr< CProcessorPerformanceTiming > > > m_NotFoundProcPerformance

vector< vector< uint64_t > > m_BlobByteCounters

CRequestTimeSeries m_IdGetblobStat

vector< unique_ptr< CWGSVDBLookupTiming > > m_WGSVDBLookupTiming

vector< unique_ptr< CAccVerHistoryRetrieveTiming > > m_AccVerHistoryRetrieveTiming

vector< unique_ptr< CProcessorRequestTimeSeries > > m_IdGetDoneByProc

vector< vector< unique_ptr< CNAResolveTiming > > > m_NAResolveTiming

CRequestTimeSeries m_IpgResolveStat

vector< unique_ptr< CResolutionTiming > > m_ResolutionNotFoundTiming

vector< unique_ptr< CCassTiming > > m_LookupCassBioseqInfoTiming

vector< unique_ptr< CResolutionTiming > > m_ResolutionErrorTiming

CMonotonicCounterSeries m_ErrorTimeSeries

vector< unique_ptr< CMyNCBITiming > > m_RetrieveMyNCBITiming

CRequestTimeSeries m_IdGetTSEChunkStat

size_t m_LogTimingThresholdMks

unique_ptr< CBacklogTiming > m_BacklogTiming

vector< unique_ptr< CLmdbCacheTiming > > m_LookupLmdbBioseqInfoTiming

vector< unique_ptr< CResolutionTiming > > m_ResolutionFoundCassandraTiming

CRequestTimeSeries m_IdGetNAStat

vector< unique_ptr< CSNPPTISLookupTiming > > m_SNPPTISLookupTiming

vector< unique_ptr< CVDBOpenTiming > > m_VDBOpenTiming

map< string, SInfo > m_NamesMap

vector< unique_ptr< CHugeBlobRetrieveTiming > > m_HugeBlobRetrievalTiming

vector< unique_ptr< CSplitHistoryRetrieveTiming > > m_SplitHistoryRetrieveTiming

vector< unique_ptr< CNotFoundBlobRetrieveTiming > > m_NotFoundBlobRetrievalTiming

vector< vector< unique_ptr< CNARetrieveTiming > > > m_NARetrieveTiming

vector< unique_ptr< CLmdbCacheTiming > > m_LookupLmdbSi2csiTiming

vector< unique_ptr< CProcessorRequestTimeSeries > > m_IdGetNADoneByProc

vector< unique_ptr< CPublicCommentRetrieveTiming > > m_PublicCommentRetrieveTiming

vector< unique_ptr< CCassResolutionTiming > > m_ResolutionCassTiming

CRequestTimeSeries m_IdAccVerHistStat

CRequestTimeSeries m_IdResolveStat

map< string, size_t > m_ProcGroupToIndex

vector< vector< unique_ptr< CTSEChunkRetrieveTiming > > > m_TSEChunkRetrieveTiming

vector< unsigned long > m_Ends

vector< unique_ptr< CLmdbResolutionTiming > > m_ResolutionLmdbTiming

vector< unique_ptr< CProcessorRequestTimeSeries > > m_IdGetTSEChunkDoneByProc

string m_OnlyForProcessor

vector< unique_ptr< CIPGResolveRetrieveTiming > > m_IPGResolveRetrieveTiming

vector< unique_ptr< CCassTiming > > m_LookupCassBlobPropTiming

vector< unique_ptr< CCassTiming > > m_LookupCassSi2csiTiming

vector< unique_ptr< CLmdbCacheTiming > > m_LookupLmdbBlobPropTiming

vector< vector< unique_ptr< CProcessorPerformanceTiming > > > m_ErrorProcPerformance

vector< unique_ptr< CProcessorRequestTimeSeries > > m_IdGetblobDoneByProc

vector< vector< unique_ptr< CProcessorPerformanceTiming > > > m_DoneProcPerformance

CMomentousCounterSeries m_ActiveRequestsStat

vector< unique_ptr< CProcessorRequestTimeSeries > > m_IdResolveDoneByProc

CRequestTimeSeries m_IdGetStat

vector< vector< unique_ptr< CProcessorPerformanceTiming > > > m_TimeoutProcPerformance

vector< uint64_t > m_HugeBlobByteCounter

unique_ptr< TPSGTiming > m_PSGTiming

CAvgPerformanceSeries m_AvgTimeSeries

virtual ~CPSGTimingBase()

CJsonNode SerializeAvgPerfSeries(const vector< pair< int, int >> &time_series, int most_ancient_time, int most_recent_time, bool loop, size_t current_index)

uint64_t GetMaxValue(void) const

TPSGTiming::TTicks GetNumberOfCoveredTicks(void) const

void RotateAvgTimeSeries(void)

Interface class (and self-factory) for request processor objects that can retrieve data from a given ...

EPSGS_Status

The GetStatus() method returns a processor current status.

Frequency histogram for data distribution of the numerical samples.

unsigned int TTicks

Type of the unit of time.

operation

Bit operations.

psg_clock_t::time_point psg_time_point_t

SInfo(CPSGTimingBase *timing, const string &name, const string &description, uint64_t *counter, const string &counter_id, const string &counter_name, const string &counter_description)

SInfo & operator=(SInfo &&)=default

SInfo(CPSGTimingBase *timing, const string &name, const string &description)

string m_CounterDescription

SInfo(const SInfo &)=default

CPSGTimingBase * m_Timing

SInfo & operator=(const SInfo &)=default

const unsigned long kNStatBins

const unsigned long kMinStatValue

#define TIMING_CLASS(class_name)

const string kStatScaleType

@ eResolutionFoundInCassandra

const unsigned long kMaxStatValue

const unsigned long kTickSpan

CHistogram< uint64_t, uint64_t, uint64_t > TOnePSGTiming

CJsonNode SerializeHistogram(const TOnePSGTiming &histogram, const string &name, const string &description, uint64_t max_value)

CHistogramTimeSeries< uint64_t, uint64_t, uint64_t > TPSGTiming

void Serialize(CNcbiOstream &, const CRawScoreVector< Key, Score > &)

Generics These throw an exception; we must implement serialization for each type.

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