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NCBI C++ ToolKit: src/algo/structure/threader/thrdspci.c Source File

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(

=0;

<nrt;

++) spc->

[

]=spc->

[

];

rtn=spc->

[

];

(

=0;

<nrt;

++) rtn[

]=0;

nt=sai->

[

]-sli->

[

];

(

=nt;

<=

;

++) {

(

=0;

<nrt;

++) rtn[

]=0;

=sai->

[0]-sli->

[0]-1;

(

=nt;

<=

;

++) {

(

<0)

;

=sai->

[

]-sli->

[

]-1;

nt=sai->

[

-1]+sli->

[

-1]+1;

(

=nt;

<=

;

++) {

(

<0)

;

rtn=spc->

[

+1];

(

=0;

<nrt;

++) rtn[

]=0;

nt=sai->

[

]+sli->

[

]+1;

=(

>=nqi) ? nqi-1 :

;

(

=nt;

<=

;

++) {

(

<0)

;

nt=sai->

[

]+sli->

[

]+1;

=sai->

[

+1]-sli->

[

+1]-1;

(

=nt;

<=

;

++) {

(

<0)

;

(

=0;

<nrt;

++) spc->

[

]=0;

(

=0;

<nsc;

++) {

rtn=spc->

[

];

(

=0;

<nrt;

++) spc->

[

] += rtn[

]; }

(

=0;

<nlp;

++) {

rtn=spc->

[

];

(

=0;

<nrt;

++) spc->

[

] += rtn[

]; }

j=0;

(

=0;

<nrt;

++)

(spc->

[

]!=spc->

[

]) { j=1;

; }

double r(size_t dimension_, const Int4 *score_, const double *prob_, double theta_)

int spci(Cor_Def *cdf, Qry_Seq *qsq, Cur_Loc *sli, Cur_Aln *sai, int n, Seg_Cmp *spc)

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