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NCBI C++ ToolKit: src/algo/structure/threader/thrdrsmp.c Source File

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1 /* $Id: thrdrsmp.c 32839 2007-03-05 20:41:55Z kazimird $ 2 *=========================================================================== 5 * National Center for Biotechnology Information 7 * This software/database is a "United States Government Work" under the 8 * terms of the United States Copyright Act. It was written as part of 9 * the author's official duties as a United States Government employee and 10 * thus cannot be copyrighted. This software/database is freely available 11 * to the public for use. The National Library of Medicine and the U.S. 12 * Government have not placed any restriction on its use or reproduction. 14 * Although all reasonable efforts have been taken to ensure the accuracy 15 * and reliability of the software and data, the NLM and the U.S. 16 * Government do not and cannot warrant the performance or results that 17 * may be obtained by using this software or data. The NLM and the U.S. 18 * Government disclaim all warranties, express or implied, including 19 * warranties of performance, merchantability or fitness for any particular 22 * Please cite the author in any work or product based on this material. 24 * =========================================================================== 26 * File Name: thrdrsmp.c 28 * Author: Stephen Bryant 30 * Initial Version Creation Date: 08/16/2000 34 * File Description: threader 38 #pragma warning(disable:4244) // disable double->float warning in MSVC 41 /* Choose randomly from a multinomial distribution */ 49 /*----------------------------------------------------*/ 50 /* pvl: Number and probabilities of parameter values */ 51 /*----------------------------------------------------*/ 53 int i

;

/* The i-th offset parameter value will be the choice */ 54 float

c;

/* Cumulative probabilites across parameter values */ 55 float r

;

/* A uniform random number on the interval 0 - 1 */ 58 /* for(i=0;i<pvl->n;i++) printf("%.4f ",pvl->p[i]); printf("pvl->p\n"); */ 60 /* r=drand48(); c=0.; */ 64 /* printf("r: %.4f\n",r); */ 66 for

(

i

=0;

i

<pvl->

n

;

i

++) {

68  /* printf("c: %.4f\n",c); */ 69  if

(c>=

r

)

return

(

i

); }

88 /*---------------------------------------------------------------------------- 89 // Returns a uniform deviate between 0.0 and 1.0. 90 // Set idum to any negative value to initialize or reinitialize the sequence. 92 // This is copied from Numerical Recipes, chapter 7.1, 1988. 93 // (ISBN 0-521-35465-X) 94 //--------------------------------------------------------------------------*/ 95  static long

ix1,ix2,ix3;

101  if

(*idum<0 || iff==0) {

103

ix1=(

IC1

-*idum) %

M1

;

108  for

(j=1; j<=97; j++) {

118

j=1 + ((97*ix3)/

M3

);

double r(size_t dimension_, const Int4 *score_, const double *prob_, double theta_)


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