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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/thrddgri_8c_source.html below:

NCBI C++ ToolKit: src/algo/structure/threader/thrddgri.c Source File

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68

nsc=spe->

nsc

;

g

=0;

ms

=0; cs=0; ls=0;

69 for

(

i

=0;

i

<nsc;

i

++) {

77  for

(j=0;j<nsc;j++)

g

+=gi[j]; }

79

tdg->

ms

=(float)

ms

-psm->

ww0

;

80

tdg->

cs

=(

float

)cs;

103 g0

=0.;

for

(

i

=0;

i

<ndi;

i

++) {

106  g0

+=((float)spn->

srr

[

i

])*cxe->

rre

[

i

];

109  g0

+=((float)spn->

srp

[

i

])*cxe->

rpe

[

i

];

112  g0

+=((float)spn->

srf

[

i

])*cxe->

rfe

[

i

]; }

137

tdg->

g

=

g

(spe,psm,tdg);

138

tdg->

g0

=

g0

(spn,cxe);

139

tdg->

ps

=((float)tdg->

g

)-tdg->

g0

;

143

tdg->

dg

=tdg->

ps

+tdg->

ms

+tdg->

cs

+tdg->

ls

;

static SLJIT_INLINE sljit_ins ms(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)

float g0(Seg_Nsm *spn, Thd_Cxe *cxe)

float dgri(Seg_Gsm *spe, Seg_Nsm *spn, Thd_Cxe *cxe, Thd_Gsm *tdg, Seq_Mtf *psm, Seg_Cmp *spc)

int g(Seg_Gsm *spe, Seq_Mtf *psm, Thd_Gsm *tdg)

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