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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/text__fasta_8cpp_source.html below:

NCBI C++ ToolKit: src/gui/widgets/seq/text_fasta.cpp Source File

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88

ostr.read(

const_cast<char

*

>

(

str

.data()),

str

.size());

In-memory stream (a la strstream or stringstream)

FASTA-format output; see also ReadFasta in <objtools/readers/fasta.hpp>

const objects::CSeq_loc & GetLocation(void) const

const objects::CBioseq_Handle & GetBioseqHandle(void) const

void SetDataSource(CFastaTextDS &ds)

CFastaTextDisplay(int x, int y, int w, int h, const char *label=NULL)

CRef< CFastaTextDS > m_DataSource

static const char * str(char *buf, int n)

virtual void Write(const CSeq_entry_Handle &handle, const CSeq_loc *location=0)

Unspecified locations designate complete sequences; non-empty custom titles override the usual title ...

void SetFlag(EFlags flag)

@ fInstantiateGaps

honor specifed gap mode; on by default

@ fAssembleParts

assemble FAR delta sequences; on by dflt

void Reset(void)

Reset reference object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static const char label[]


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