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NCBI C++ ToolKit: src/gui/packages/pkg_sequence_edit/submission_wizard.cpp Source File

wxWindowID

,

wxString& caption,

wxPoint& pos,

wxSize&

,

style )

: m_Workbench(wb), m_ProjectHandle(ph), m_ProjectItem(

)

(parent,

, caption, pos,

, style);

(

entry :

->GetData().GetEntrys())

SetExtraStyle(wxWS_EX_VALIDATE_RECURSIVELY | wxWS_EX_BLOCK_EVENTS);

wxFrame::Create( parent,

, caption, pos,

, style );

GetSizer()->SetSizeHints(

);

wxBoxSizer* itemBoxSizer1 =

wxBoxSizer(wxVERTICAL);

SetSizer(itemBoxSizer1);

wxPanel* itemPanel1 =

wxPanel(

,

);

itemBoxSizer1->Add(itemPanel1, 1, wxGROW | wxALL, 0);

wxBoxSizer* itemBoxSizer2 =

wxBoxSizer(wxVERTICAL);

itemPanel1->SetSizer(itemBoxSizer2);

itemBoxSizer2->Add(

, 1, wxGROW | wxALL, 0);

wxStaticLine* itemStaticLine29 =

wxStaticLine(itemPanel1,

, wxDefaultPosition, wxDefaultSize, wxLI_HORIZONTAL);

itemBoxSizer2->Add(itemStaticLine29, 0, wxGROW | wxALL, 5);

itemBoxSizer2->Add(

, 0, wxGROW | wxTOP | wxBOTTOM, 5);

wxButton* itemButton4 =

wxButton( itemPanel1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

->Add(itemButton4, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

->Add(5, 5, 1, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxButton* itemButton6 =

wxButton( itemPanel1,

,

(

), wxDefaultPosition, wxDefaultSize, 0 );

->Add(itemButton6, 0, wxALIGN_CENTER_VERTICAL|wxALL, 5);

wxHyperlinkCtrl* itemHyperlinkCtrl =

wxHyperlinkCtrl( itemPanel1, wxID_HELP,

(

),

(

), wxDefaultPosition, wxDefaultSize, wxHL_DEFAULT_STYLE );

itemHyperlinkCtrl->SetForegroundColour(wxColour(192, 192, 192));

->Add(itemHyperlinkCtrl, 0, wxALIGN_CENTER_VERTICAL|wxTOP|wxBOTTOM, 5);

wxColour bg_color = wxSystemSettings::GetColour(wxSYS_COLOUR_FRAMEBK);

(

= 0;

<

->GetPageCount(); ++

) {

->GetPage(

)->SetBackgroundColour(bg_color);

version_str =

;

version_str +=

+ wxGetOsDescription().ToStdString();

(!cit_sub.IsSetDate()) {

cit_sub.SetDate(*today);

found_pub =

;

(!found_pub & it->IsPub()) {

citgen->SetGen().SetCit(

);

s_IsCitSubPub(

& desc)

IsReferencePub(

& seqdesc)

(!seqdesc.

()) {

(pubdesc.

().

().front()->IsGen() || pubdesc.

().

().front()->IsArticle())) {

s_AddStringToField(

& val,

& field) {

field.

().SetStrs().push_back(old_val);

field.

().SetStrs().push_back(val);

field.

().SetStrs().push_back(val);

IsEmptyAuthor(

& author) {

IsEmptyRefPub(

& pub)

(!pub.

()) {

(IsEmptyAuthor(*it)) {

s_IsEmptyStructuredComment(

& user)

(

it : user.

()) {

&& it->GetLabel().IsStr()

&& (

(it->GetLabel().GetStr(),

) ||

(it->GetLabel().GetStr(),

))) {

pub->

().

().Set().push_back(MakeEmptyRefPub());

first_ref_pub =

;

}

(

) {

wxWindow* wnd =

->GetPage(event.GetSelection());

wxString tooltip = win->GetToolTipText();

(!tooltip.IsEmpty())

win->SetToolTip(tooltip);

(

child : win->GetChildren())

(!current_page)

;

TransferDataFromWindow();

wxWindow* wnd =

->GetCurrentPage();

(page != wxNOT_FOUND) {

(

<<

);

wxWindow* wnd =

->GetCurrentPage();

(page != wxNOT_FOUND) {

(

<<

);

first_pub_in_list =

;

(it->Which() == desc.

()) {

}

(it->IsPub()) {

(first_pub_in_list && first_pub) {

}

(it->GetPub().Equals(desc.

())) {

first_pub_in_list =

;

unique_ptr<CObjectIStream>(

);

unique_ptr<CObjectIStream> pObjIstrm(

(!descr.

()) {

(

it : descr.

()) {

(it->IsSource()) {

(it->IsUser()) {

(it->IsPub()) {

is_reference_pub = first_ref_pub && IsReferencePub(*it);

(is_reference_pub) {

first_ref_pub =

;

(entry.

()) {

}

(entry.

()) {

(

.IsSetDescr()) {

(

.IsSetSeq_set()) {

(

entry :

.GetSeq_set()) {

wxFileDialog asn_open_file(

,

(

),

, wxEmptyString,

(

) +

wxFD_OPEN | wxFD_FILE_MUST_EXIST);

(asn_open_file.ShowModal() == wxID_OK)

wxString path = asn_open_file.GetPath();

unique_ptr<istream> instream(

(path.fn_str()));

sType = pObjIstrm->ReadFileHeader();

(sType == CSubmit_block::GetTypeInfo()->GetName()) {

}

(sType == CSeq_submit::GetTypeInfo()->GetName()) {

first_ref_pub =

;

}

(sType == CSeq_entry::GetTypeInfo()->GetName()) {

first_ref_pub =

;

(!pObjIstrm->EndOfData())

(sType != CSeqdesc::GetTypeInfo()->GetName())

sType = pObjIstrm->ReadFileHeader();

first_ref_pub =

;

(sType == CSeqdesc::GetTypeInfo()->GetName()) {

is_reference_pub = first_ref_pub && IsReferencePub(*desc);

(is_reference_pub) {

first_ref_pub =

;

(pObjIstrm->EndOfData())

sType = pObjIstrm->ReadFileHeader();

any_changes =

;

!

->GetContact().GetContact().GetName().IsName() ||

!

->GetContact().GetContact().GetName().GetName().IsSetLast())

->Assign(*entry);

submission->

().SetEntrys().push_back(

);

new_item->

().SetSubmit(*submission);

wxBeginBusyCursor();

}

(desc.

()) {

already_has =

;

(

.IsSetDescr() &&

.GetDescr().IsSet()) {

(

di :

.GetDescr().Get()) {

(di->Equals(desc)) {

already_has =

;

new_desc->

(desc);

.AddCommand(*cmdAddDesc);

any_changes =

;

.AddCommand(*chg);

any_changes =

;

.AddCommand(*cmdAddDesc);

.AddCommand(*cmdAddDesc);

any_changes =

;

std::unordered_map <CSubSource::TSubtype, bool> found_first;

(sit->IsSetSubtype() && sit->IsSetName() &&

findit = found_first.find(sit->GetSubtype());

(findit != found_first.end()) {

found =

;

((*dit)->IsSetSubtype() && (*dit)->GetSubtype() == sit->GetSubtype()) {

(*dit)->SetName(sit->GetName());

found_first[sit->GetSubtype()] =

;

any_changes =

;

new_desc->

(desc);

(!di->

(desc)) {

.AddCommand(*chg);

any_changes =

;

.AddCommand(*cmdAddDesc);

any_changes =

;

any_changes =

;

any_changes =

;

found_any =

;

found =

;

.AddCommand(*chg);

any_changes =

;

(

(template_prefix, this_prefix)) {

(!found && !add_to_set) {

.AddCommand(*cmdAddDesc);

.AddCommand(*cmdAddDesc);

any_changes =

;

(!found_any && add_to_set && !s_IsEmptyStructuredComment(user)) {

.AddCommand(*cmdAddDesc);

any_changes =

;

any_change =

;

(

t_it : template_user.

()) {

(t_it->IsSetLabel() && t_it->IsSetData() && (t_it->GetData().IsStr() || t_it->GetData().IsStrs())) {

found =

;

(

& e_it : existing_user.

()) {

(e_it->IsSetLabel() && e_it->GetLabel().Equals(t_it->GetLabel())) {

(t_it->GetData().IsStr()) {

any_change |= s_AddStringToField(t_it->GetData().GetStr(), *e_it);

(

s : t_it->GetData().GetStrs()) {

any_change |= s_AddStringToField(s, *e_it);

(

->GetCit().GetAuthors().GetNames().IsStd() &&

!

->GetCit().GetAuthors().GetNames().GetStd().front()->GetName().GetName().IsSetLast())) {

->SetCit().SetAuthors().SetNames().SetStr().push_back(

);

wxFileDialog asn_save_file(

,

(

),

, wxEmptyString,

(

) +

wxFD_SAVE | wxFD_OVERWRITE_PROMPT);

(asn_save_file.ShowModal() == wxID_OK)

wxString path = asn_save_file.GetPath();

(!path.IsEmpty())

!s_IsEmptyStructuredComment(user)) {

(it->IsSource()) {

(!s_IsEmptySource(it->GetSource())) {

}

(it->IsPub()) {

& pub = it->GetPub();

!IsEmptyRefPub(*(pub.

().

().front()))) {

wxString& caption,

wxPoint& pos,

wxSize&

,

style )

(

= 0;

<

->GetPageCount(); ++

) {

->GetPage(

)->TransferDataToWindow();

wxWindow *win =

->GetCurrentPage();

wxWindow *win =

->GetCurrentPage();

(anchor.IsEmpty())

wxURI help_url (

(

) + anchor);

wxString help_encoded_url = help_url.BuildURI();

wxLaunchDefaultBrowser(help_encoded_url, 0);

wxMessageBox (

(

));

answer = wxMessageBox (

(

),

(

), wxYES_NO | wxICON_QUESTION);

(answer == wxYES)

so =

.GetCompleteSeq_entry();

wxFileDialog asn_save_file(

,

(

),

, wxEmptyString,

wxFD_SAVE|wxFD_OVERWRITE_PROMPT);

(asn_save_file.ShowModal() == wxID_OK)

wxString path = asn_save_file.GetPath();

( !path.IsEmpty())

<<

;

<<

;

report->SetTitle(

(

));

report->Show(

);

taskService->

(*task);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

CAppTaskService - Application Task Service.

CAppTask - default implementation of IAppTask, use it as a base class for custom tasks.

@Auth_list.hpp User-defined methods of the data storage class.

void SetToTime(const CTime &time, EPrecision prec=ePrecision_second)

CEvent - generic event implementation TODO TODO - Attachments.

static wxString GetDialogFilter(EFileType fileType)

EFormat

The formats are checked in the same order as declared here.

@ eBinaryASN

Binary ASN.1.

@ eUnknown

unknown format

static const char * GetFormatName(EFormat format)

static EFormat Format(const string &path, EOnError onerror=eDefault)

Guess file format.

wxString GetWorkDir() const

CUndoManager & GetUndoManager()

virtual CScope * GetScope() const

virtual void ApplySubmitBlock(objects::CSubmit_block &block)

virtual void ApplyDescriptor(objects::CSeqdesc &desc)

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

void SetText(const wxString &text)

virtual void ApplyDescriptor(objects::CSeqdesc &desc)

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

@Name_std.hpp User-defined methods of the data storage class.

virtual void ApplyDescriptor(objects::CSeqdesc &desc)

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

EEventSubtype GetSubtype() const

@Pubdesc.hpp User-defined methods of the data storage class.

CRaiseWindowTask(wxWindow *win)

virtual IAppTask::ETaskState x_Run()

override this function in derived classes

virtual void ApplySubmitBlock(objects::CSubmit_block &block)

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

virtual void ApplyDescriptor(objects::CSeqdesc &desc)

@Seq_descr.hpp User-defined methods of the data storage class.

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

virtual void SetSeqEntryHandle(objects::CSeq_entry_Handle seh)

void SetProjectItem(objects::CProjectItem *pi)

~CSubmissionWizard()

Destructor.

virtual void UpdateOnPageChange(wxWindow *current_page)

void OnPageChanging(wxBookCtrlEvent &event)

void x_UpdateSubmitBlock()

CSubmitterPanel * m_SubmitterPanel

COrganismInfoPanel * m_OrgPanel

wxBitmap GetBitmapResource(const wxString &name)

Retrieves bitmap resources.

void OnDataChanged(CEvent *evt)

void CreateControls()

Creates the controls and sizers.

bool ReportMissingFields()

void x_UpdateDescriptors()

void x_ExtractDescriptorsFromSeqEntry(const objects::CSeq_entry &entry, bool &first_ref_pub)

CGenomeInfoPanel * m_GenomePanel

CRef< objects::CSubmit_block > m_SubmitBlock

CConstRef< objects::CSeq_submit > m_SeqSubmit

void ImportTemplate(wxCommandEvent &event)

virtual void ApplySubmitCommand()

static CSubmissionWizard * GetInstance(wxWindow *parent, IWorkbench *wb, CRef< CGBProjectHandle > ph, CRef< CProjectItem > pi, wxWindowID id=ID_CSUBMISSIONWIZARD, const wxString &caption=_("Submission Wizard"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(650, 548), long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxMINIMIZE_BOX|wxMAXIMIZE_BOX|wxCLOSE_BOX)

vector< CRef< objects::CSeqdesc > > m_Descriptors

bool x_ApplyMolinfoToRecords(const objects::CSeqdesc &desc, CCmdComposite &cmd)

void OnBackbtnClick(wxCommandEvent &event)

wxEVT_COMMAND_BUTTON_CLICKED event handler for ID_CSUBMISSIONBACKBTN

wxBoxSizer * m_BottomSizer

void OnHelp(wxHyperlinkEvent &event)

void ConnectListener(void)

void OnPageChanged(wxBookCtrlEvent &event)

void Init()

Initialises member variables.

void ApplySubmitBlock(const objects::CSubmit_block &block)

CSubmissionWizard()

Constructors.

void x_ExtractDescriptors(const objects::CSeq_descr &descr, bool &first_ref_pub)

void OnContinuebtnClick(wxCommandEvent &event)

wxEVT_COMMAND_BUTTON_CLICKED event handler for ID_CSUBMISSIONCONTBTN

static CSubmissionWizard * m_Instance

bool x_ApplyDescriptorToRecord(const objects::CSeqdesc &desc, CCmdComposite &cmd)

ICommandProccessor * m_CmdProcessor

bool x_ApplySourceDescriptorToRecord(const objects::CBioSource &src, CCmdComposite &cmd)

bool Create(wxWindow *parent, wxWindowID id=ID_CSUBMISSIONWIZARD, const wxString &caption=_("Submission Wizard"), const wxPoint &pos=wxDefaultPosition, const wxSize &size=wxSize(650, 548), long style=wxCAPTION|wxRESIZE_BORDER|wxSYSTEM_MENU|wxMINIMIZE_BOX|wxMAXIMIZE_BOX|wxCLOSE_BOX)

Creation.

void x_SetupCmdProcessor()

static bool ShowToolTips()

Should we show tooltips?

bool x_MergeDBLink(const objects::CUser_object &template_user, objects::CUser_object &existing_user)

bool x_ApplyOrReplaceDescriptorToRecord(const objects::CSeqdesc &desc, CCmdComposite &cmd, objects::CSeq_inst::TMol mol)

void DisconnectListener(void)

bool x_ValidateCurrentPage()

CRef< CProjectItem > m_ProjectItem

void x_InitializeSubmitBlock()

wxIcon GetIconResource(const wxString &name)

Retrieves icon resources.

void x_SetSubmissionDate()

void ExtractDescriptor(const objects::CSeqdesc &desc, bool first_pub)

void x_UpdateSeqEntryHandle()

CRef< CGBProjectHandle > m_ProjectHandle

CSubAnnotationPanel * m_AnnotationPanel

CReferencePanel * m_ReferencePanel

void ExportTemplate(wxCommandEvent &event)

void x_InitializeDescriptorList()

virtual bool TransferDataToWindow()

void x_LoadProjectItemData()

bool x_ApplyUserDescriptorToRecord(const objects::CUser_object &user, bool add_to_set, CCmdComposite &cmd)

void x_TransferImportedSubSources(const objects::CBioSource &src, objects::CBioSource &dst)

CSubValidateDiscPanel * m_ValidatePanel

CGeneralPanel * m_GeneralPanel

objects::CSeq_entry_Handle m_Seh

CSubMolinfoPanel * m_MoleculePanel

virtual void ApplySubmitBlock(objects::CSubmit_block &block)

void SetObjectType(EObjectType obj_type)

@ eObjectType_StructuredComment

EObjectType GetObjectType() const

virtual void Execute(IEditCommand *command, wxWindow *window=0)=0

virtual void ApplyCommand()

virtual bool IsLastPage() const

virtual bool IsFirstPage() const

virtual void ReportMissingFields(string &text)

virtual void ApplyDescriptor(objects::CSeqdesc &desc)

virtual bool StepBackward()

virtual bool StepForward()

virtual wxString GetName() const

virtual void ApplySubmitBlock(objects::CSubmit_block &block)

virtual wxString GetAnchor()

IWorkbench is the central interface in the application framework.

CChangeUnindexedObjectCommand< objects::CSubmit_block > CChangeSubmitBlockCommand

std::ofstream out("events_result.xml")

main entry point for tests

void GetGBenchVersionInfo(size_t &ver_major, size_t &ver_minor, size_t &ver_patch_level, CTime &build_date)

@ eTakeOwnership

An object can take ownership of another.

#define LOG_POST(message)

This macro is deprecated and it's strongly recomended to move in all projects (except tests) to macro...

void Error(CExceptionArgs_Base &args)

const string & GetMsg(void) const

Get message string.

void Info(CExceptionArgs_Base &args)

CIRef< T > GetServiceByType()

retrieves a typed reference to a service, the name of C++ type is used as the name of the service.

void AddTask(IAppTask &task)

Add a task to the queue.

ETaskState

List of task states defining the task management FSM.

@ eCompleted

successfully finished

virtual void RemoveListener(CEventHandler *listener)

Remove a listener.

static void GetLabel(const CObject &obj, string *label, ELabelType type=eDefault)

#define ON_EVENT(type, id, handler)

#define END_EVENT_MAP()

Ends definition of Command Map.

#define BEGIN_EVENT_MAP(thisClass, baseClass)

Begins definition of Command Map for CEventHandler-derived class.

virtual void AddListener(CEventHandler *listener, int pool_name=ePool_Default)

Add a listener.

virtual void Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive)

Set object to copy of another one.

#define MSerial_AsnText

I/O stream manipulators –.

virtual bool Equals(const CSerialObject &object, ESerialRecursionMode how=eRecursive) const

Check if both objects contain the same values.

ESerialDataFormat

Data file format.

@ eSerial_AsnText

ASN.1 text.

@ eSerial_AsnBinary

ASN.1 binary.

pair< TObjectPtr, TTypeInfo > ObjectInfo(C &obj)

static CObjectIStream * Open(ESerialDataFormat format, CNcbiIstream &inStream, bool deleteInStream)

Create serial object reader and attach it to an input stream.

CSeq_entry_Handle GetSeq_entryHandle(CDataLoader *loader, const TBlobId &blob_id, EMissing action=eMissing_Default)

Get Seq-entry handle by its blob-id, with possible loading.

TClass GetClass(void) const

CBioseq_set_Handle GetParentBioseq_set(void) const

Return a handle for the parent Bioseq-set, or null handle.

CSeq_entry_Handle GetTopLevelEntry(void) const

Get top level Seq-entry handle.

CSeq_entry_Handle GetParentEntry(void) const

Return a handle for the parent seq-entry of the bioseq.

bool IsSetClass(void) const

CSeq_entry_Handle GetSeq_entry_Handle(void) const

TObjectType * GetPointer(void) THROWS_NONE

Get pointer,.

void Reset(void)

Reset reference object.

void Reset(void)

Reset reference object.

TObjectType & GetNCObject(void) const

Get object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

IO_PREFIX::ofstream CNcbiOfstream

Portable alias for ofstream.

IO_PREFIX::ifstream CNcbiIfstream

Portable alias for ifstream.

static string IntToString(int value, TNumToStringFlags flags=0, int base=10)

Convert int to string.

static bool Equal(const CTempString s1, SIZE_TYPE pos, SIZE_TYPE n, const char *s2, ECase use_case=eCase)

Test for equality of a substring with another string.

CTime CurrentTime(CTime::ETimeZone tz=CTime::eLocal, CTime::ETimeZonePrecision tzp=CTime::eTZPrecisionDefault)

static const char label[]

bool IsSetAuthors(void) const

Check if a value has been assigned to Authors data member.

const TAuthors & GetAuthors(void) const

Get the Authors member data.

bool IsSetAffil(void) const

Check if a value has been assigned to Affil data member.

const TName & GetName(void) const

Get the Name member data.

bool IsSetNames(void) const

Check if a value has been assigned to Names data member.

bool IsSetName(void) const

Author, Primary or Secondary Check if a value has been assigned to Name data member.

const TNames & GetNames(void) const

Get the Names member data.

const TStd & GetStd(void) const

Get the variant data.

E_Choice Which(void) const

Which variant is currently selected.

bool IsStd(void) const

Check if variant Std is selected.

@ e_not_set

No variant selected.

const TSubtype & GetSubtype(void) const

Get the Subtype member data.

bool IsSetOrg(void) const

Check if a value has been assigned to Org data member.

bool IsSetSubtype(void) const

Check if a value has been assigned to Subtype data member.

const TOrg & GetOrg(void) const

Get the Org member data.

void SetOrg(TOrg &value)

Assign a value to Org data member.

TSubtype & SetSubtype(void)

Assign a value to Subtype data member.

bool IsSetItem(void) const

Check if a value has been assigned to Item data member.

bool IsSetLabel(void) const

user-defined label Check if a value has been assigned to Label data member.

TDescr & SetDescr(void)

Assign a value to Descr data member.

bool IsSubmit(void) const

Check if variant Submit is selected.

void SetLabel(const TLabel &value)

Assign a value to Label data member.

const TLabel & GetLabel(void) const

Get the Label member data.

const TItem & GetItem(void) const

Get the Item member data.

const TDescr & GetDescr(void) const

Get the Descr member data.

bool IsEntry(void) const

Check if variant Entry is selected.

void SetItem(TItem &value)

Assign a value to Item data member.

const TEntry & GetEntry(void) const

Get the variant data.

const TSubmit & GetSubmit(void) const

Get the variant data.

const TStr & GetStr(void) const

Get the variant data.

bool IsSetData(void) const

the object itself Check if a value has been assigned to Data data member.

bool IsSetType(void) const

type of object within class Check if a value has been assigned to Type data member.

bool IsStrs(void) const

Check if variant Strs is selected.

const TStrs & GetStrs(void) const

Get the variant data.

const TData & GetData(void) const

Get the Data member data.

bool IsName(void) const

Check if variant Name is selected.

bool IsStr(void) const

Check if variant Str is selected.

bool IsSetLast(void) const

Check if a value has been assigned to Last data member.

TData & SetData(void)

Assign a value to Data data member.

const TData & GetData(void) const

Get the Data member data.

void SetData(TData &value)

Assign a value to Data data member.

const TType & GetType(void) const

Get the Type member data.

const TLast & GetLast(void) const

Get the Last member data.

const TName & GetName(void) const

Get the variant data.

const TMod & GetMod(void) const

Get the Mod member data.

const TTaxname & GetTaxname(void) const

Get the Taxname member data.

bool IsSetMod(void) const

Check if a value has been assigned to Mod data member.

bool IsSetOrgname(void) const

Check if a value has been assigned to Orgname data member.

bool IsSetTaxname(void) const

preferred formal name Check if a value has been assigned to Taxname data member.

const TOrgname & GetOrgname(void) const

Get the Orgname member data.

bool IsSet(void) const

Check if a value has been assigned to data member.

const Tdata & Get(void) const

Get the member data.

const TGen & GetGen(void) const

Get the variant data.

bool IsGen(void) const

Check if variant Gen is selected.

const TSeq & GetSeq(void) const

Get the variant data.

const TSet & GetSet(void) const

Get the variant data.

bool IsSeq(void) const

Check if variant Seq is selected.

bool IsSet(void) const

Check if variant Set is selected.

@ eClass_nuc_prot

nuc acid and coded proteins

const TUser & GetUser(void) const

Get the variant data.

bool IsMolinfo(void) const

Check if variant Molinfo is selected.

void SetPub(TPub &value)

Assign a value to Pub data member.

TPub & SetPub(void)

Select the variant.

const TSource & GetSource(void) const

Get the variant data.

const TPub & GetPub(void) const

Get the variant data.

bool IsSource(void) const

Check if variant Source is selected.

bool IsSetBiomol(void) const

Check if a value has been assigned to Biomol data member.

const Tdata & Get(void) const

Get the member data.

TSource & SetSource(void)

Select the variant.

bool IsSetDescr(void) const

descriptors Check if a value has been assigned to Descr data member.

bool IsSet(void) const

Check if a value has been assigned to data member.

TBiomol GetBiomol(void) const

Get the Biomol member data.

EMol

molecule class in living organism

bool IsPub(void) const

Check if variant Pub is selected.

bool IsSetPub(void) const

the citation(s) Check if a value has been assigned to Pub data member.

TUser & SetUser(void)

Select the variant.

E_Choice Which(void) const

Which variant is currently selected.

const TPub & GetPub(void) const

Get the Pub member data.

const TDescr & GetDescr(void) const

Get the Descr member data.

const TMolinfo & GetMolinfo(void) const

Get the variant data.

bool IsUser(void) const

Check if variant User is selected.

@ e_User

user defined object

@ e_Source

source of materials, includes Org-ref

@ eMol_na

just a nucleic acid

bool IsSetData(void) const

Check if a value has been assigned to Data data member.

void SetSub(TSub &value)

Assign a value to Sub data member.

const TEntrys & GetEntrys(void) const

Get the variant data.

const TData & GetData(void) const

Get the Data member data.

void SetData(TData &value)

Assign a value to Data data member.

const TSub & GetSub(void) const

Get the Sub member data.

bool IsEntrys(void) const

Check if variant Entrys is selected.

The blob sat and sat key Both must be positive integers</td > n< td > Non empty string The interpretation of the blob id depends on a processor Cassandra n processor expects the following format

static void text(MDB_val *v)

void ReportSubWizardUsage(const string &action_name)

Report usage of the submission wizard dialog.

const string version

version string

const struct ncbi::grid::netcache::search::fields::SIZE size

void copy(Njn::Matrix< S > *matrix_, const Njn::Matrix< T > &matrix0_)

static SLJIT_INLINE sljit_ins msg(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)

unique_ptr< CObjectIStream > xCreateASNStream(CFormatGuess::EFormat format, unique_ptr< istream > &instream)

static void restoreRecursivelyAllToolTips(wxWindow *win)

CRef< CCmdComposite > CleanupCommand(objects::CSeq_entry_Handle orig_seh, bool extended, bool do_tax)

string ToStdString(const wxString &s)

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