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34 #ifndef SU_SEQUENCE_SET__HPP 35 #define SU_SEQUENCE_SET__HPP 54 Sequence(ncbi::objects::CBioseq& bioseq);
61 unsigned int Length(
void)
const{
returnm_sequenceString.size(); }
64 constncbi::objects::CSeq_id& GetPreferredIdentifier(
void)
const;
65 constncbi::objects::CBioseq::TId&
GetAllIdentifiers(
void)
const{
returnm_bioseqASN->GetId(); }
66 boolMatchesSeqId(
constncbi::objects::CSeq_id& seqID)
const;
73 typedefstd::list < ncbi::CRef < ncbi::objects::CSeq_entry > >
SeqEntryList;
std::list< ncbi::CRef< ncbi::objects::CSeq_entry > > SeqEntryList
std::list< ncbi::CRef< Sequence > > SequenceList
std::string m_sequenceString
unsigned int Length(void) const
const ncbi::objects::CBioseq::TId & GetAllIdentifiers(void) const
ncbi::CRef< ncbi::objects::CBioseq > m_bioseqASN
Include a standard set of the NCBI C++ Toolkit most basic headers.
#define END_SCOPE(ns)
End the previously defined scope.
#define BEGIN_SCOPE(ns)
Define a new scope.
#define NCBI_STRUCTUTIL_EXPORT
Magic spell ;-) needed for some weird compilers... very empiric.
Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.
The NCBI C++/STL use hints.
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