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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/style__manager_8cpp_source.html below:

NCBI C++ ToolKit: src/app/cn3d/style_manager.cpp Source File

SCALE = 10000;

asnColor->SetScale_factor(SCALE);

asnColor->SetRed((

) (vec[0] * SCALE));

asnColor->SetGreen((

) (vec[1] * SCALE));

asnColor->SetBlue((

) (vec[2] * SCALE));

asnColor->SetAlpha(SCALE);

SCALE = 10000;

1.0 * asnColor.

() / SCALE,

1.0 * asnColor.

() / SCALE,

1.0 * asnColor.

() / SCALE

lStyle->

=

;

:

( 0.620 + 2.530) / (1.380 + 2.530);

:

(-2.530 + 2.530) / (1.380 + 2.530);

:

(-0.780 + 2.530) / (1.380 + 2.530);

:

(-0.900 + 2.530) / (1.380 + 2.530);

:

( 0.290 + 2.530) / (1.380 + 2.530);

:

(-0.850 + 2.530) / (1.380 + 2.530);

:

(-0.740 + 2.530) / (1.380 + 2.530);

:

( 0.480 + 2.530) / (1.380 + 2.530);

:

(-0.400 + 2.530) / (1.380 + 2.530);

:

( 1.380 + 2.530) / (1.380 + 2.530);

:

( 1.060 + 2.530) / (1.380 + 2.530);

:

(-1.500 + 2.530) / (1.380 + 2.530);

:

( 0.640 + 2.530) / (1.380 + 2.530);

:

( 1.190 + 2.530) / (1.380 + 2.530);

:

( 0.120 + 2.530) / (1.380 + 2.530);

:

(-0.180 + 2.530) / (1.380 + 2.530);

:

(-0.050 + 2.530) / (1.380 + 2.530);

:

( 0.810 + 2.530) / (1.380 + 2.530);

:

( 0.260 + 2.530) / (1.380 + 2.530);

:

( 1.080 + 2.530) / (1.380 + 2.530);

:

:

:

1;

:

:

-1;

(!residue || !atomStyle) {

(

);

generalStyle = &(settings.

);

((!backboneStyle && !generalStyle) || (backboneStyle && generalStyle)) {

(

);

(saveBackboneStyle) *saveBackboneStyle = backboneStyle;

(saveGeneralStyle) *saveGeneralStyle = generalStyle;

(sidechainStyle && sidechainStyle->

) {

backboneStyle =

;

generalStyle = sidechainStyle;

(backboneStyle ? backboneStyle->

: generalStyle->

) {

(

);

(colorStyle) {

GetAlignmentColor(molecule->

, residue->

- 1, colorStyle);

pos = 1.0 * (residue->

- 1) / (molecule->

() - 1);

->maxTemperature !=

->minTemperature) ?

(

->maxTemperature -

->minTemperature)) :

hydrophobicity = (residue->

()) ?

(residue->

) {

:

:

ch =

((

) residue->

);

(ch < 'A' || ch >

)

(

);

atomStyle->

= 0.6;

atomStyle->

= 1.0;

(

);

bondLength,

*bondStyle)

*info1 =

->graph->GetAtomInfo(atom1),

*info2 =

->graph->GetAtomInfo(atom2);

(!

(info1->

, atom1, coord1, &atomStyle1, &backboneStyle1, &generalStyle1) ||

!

(info2->residue, atom2, coord2, &atomStyle2, &backboneStyle2, &generalStyle2))

bondStyle->

.

= info2->glName;

bondStyle->

=

;

isSpecial =

;

generalStyle2 = generalStyle1;

backboneStyle2 =

;

generalStyle1 = generalStyle2;

backboneStyle1 =

;

(

);

style1 = backboneStyle1->

;

style1 = generalStyle1->

;

style2 = backboneStyle2->

;

style2 = generalStyle2->

;

bondStyle->

=

;

bondStyle->

.

= settings2.virtualDisulfideColor;

bondStyle->

=

;

&atomStyleV, &backboneStyleV, &generalStyleV) ||

backboneStyleV->

!= style1 ||

&atomStyleV, &backboneStyleV, &generalStyleV) ||

backboneStyleV->

!= style2 ||

(atomStyle1.

> bondLength) {

bondStyle->

=

;

(atomStyle2.

> bondLength) {

bondStyle->

=

;

anyResidueVisible =

;

*molecule =

->graph->molecules.find(object3D.

)->second;

anyResidueVisible =

;

(!anyResidueVisible) {

(

);

(

);

moleculeID,

residueID)

*molecule =

->graph->molecules.find(moleculeID)->second;

(!(*d)->isDisplayed)

ResidueMap::const_iterator residues = (*d)->residues.find(molecule->

);

(residues != (*d)->residues.end() &&

residues->second[residueID - 1] ==

) {

StyleMap::const_iterator userStyle =

.find((*d)->styleID);

(

<< (*d)->styleID <<

);

style = &(userStyle->second);

*molecule =

->graph->molecules.find(moleculeID)->second;

(!(*d)->isDisplayed)

ResidueMap::const_iterator residues = (*d)->residues.find(molecule->

);

(residues != (*d)->residues.end())

*molecule =

->graph->molecules.find(moleculeID)->second;

(!(*d)->isDisplayed)

ResidueMap::const_iterator residues = (*d)->residues.find(molecule->

);

(residues != (*d)->residues.end() && residues->second[residueID - 1] ==

)

black(0,0,0);

(!molecule || !molecule->

(&

))

black;

(dialog.ShowModal() == wxOK);

list < int > IntList;

StyleMap::const_iterator s, se =

.end();

(s=

.begin(); s!=se; ++s) keys.push_back(s->first);

IntList::const_iterator

, ie = keys.end();

(

=keys.begin();

!=ie; ++

) {

entry->SetId().Set(*

);

(!

.find(*i)->second.SaveSettingsToASN(&(entry->SetStyle())))

;

dictionary->SetStyle_table().push_back(entry);

dictionary.release();

CCn3d_style_dictionary::TStyle_table::const_iterator

, te = styleDictionary.

().end();

= (*t)->GetId().Get();

(

);

(!

[

].LoadSettingsFromASN((*t)->GetStyle()))

;

= 10000;

(

=1;

<

; ++

) {

StyleMap::iterator u =

.find(

);

removedStyleID = -1;

(annotation == u->GetPointer()) {

removedStyleID = (*u)->styleID;

(u == ue)

;

((*u)->styleID == removedStyleID)

(annotation ==

->GetPointer())

(annotation == d->GetPointer())

UserAnnotationList::iterator

;

doSwap =

;

}

(!moveUp) {

residuesASN->clear();

StyleManager::ResidueMap::const_iterator

, re = residueMap.end();

(

=residueMap.begin();

!=re; ++

) {

CCn3d_user_annotation::TResidues::iterator

,

= residuesASN->end();

(

=residuesASN->begin();

!=

; ++

)

((*l)->GetStructure_id().GetMmdb_id().Get() ==

->first->mmdbID)

;

mmdbID->

(

->first->mmdbID);

loc->SetStructure_id().SetMmdb_id(*mmdbID);

(

);

residuesASN->push_back(loc);

= residuesASN->end();

molecule->SetMolecule_id().Set(

->first->moleculeID);

(*l)->SetResidues().push_back(molecule);

(

=0;

<

->second.size(); ++

)

(!

->second[

])

;

(

!=

->second.size()) {

(first < r->second.size()) {

(first < r->second.size() && !

->second[

]) ++

;

(

>=

->second.size())

;

(

+ 1 <

->second.size() &&

->second[

+ 1]) ++

;

range->SetFrom().Set(

+ 1);

range->SetTo().Set(

+ 1);

molecule->SetResidues().push_back(range);

(molecule->GetResidues().size() == 0) {

(

);

(!annotations)

;

annotations->ResetAnnotations();

annotation->SetName((*a)->name);

annotation->SetDescription((*a)->description);

annotation->SetStyle_id().Set((*a)->styleID);

annotation->SetIs_on((*a)->isDisplayed);

(

);

annotations->SetAnnotations().push_back(annotation);

CCn3d_user_annotation::TResidues::const_iterator o, oe = residuesASN.end();

(o=residuesASN.begin(); o!=oe; ++o) {

((*o)->GetStructure_id().IsMmdb_id()) {

mmdbID = (*o)->GetStructure_id().GetMmdb_id().Get();

(

);

CCn3d_object_location::TResidues::const_iterator m, me = (*o)->GetResidues().end();

(m=(*o)->GetResidues().begin(); m!=me; ++m) {

moleculeID = (*m)->GetMolecule_id().Get();

(

);

(

<< mmdbID <<

);

vector < bool >& residueFlags = (*residueMap)[identifier];

(residueFlags.size() == 0)

residueFlags.resize(identifier->

,

);

((*m)->IsSetResidues()) {

CCn3d_molecule_location::TResidues::const_iterator

, re = (*m)->GetResidues().end();

(

=(*m)->GetResidues().begin();

!=re; ++

) {

(

=(*r)->GetFrom().Get();

<=(*r)->GetTo().Get(); ++

) {

(

> 0 &&

<= (

)residueFlags.size()) {

residueFlags[

- 1] =

;

(

);

(

=0;

<residueFlags.size(); ++

) residueFlags[

] =

;

(!annotations.IsSetAnnotations())

;

CCn3d_user_annotations::TAnnotations::const_iterator

, ae = annotations.GetAnnotations().end();

(

=annotations.GetAnnotations().begin();

!=ae; ++

) {

userAnnot->

= (*a)->GetName();

((*a)->IsSetDescription())

userAnnot->

= (*a)->GetStyle_id().Get();

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

User-defined methods of the data storage class.

const BlockMultipleAlignment * GetCurrentMultipleAlignment(void) const

bool IsAligned(const Sequence *sequence, unsigned int seqIndex) const

double averageTemperature

static const double NO_TEMPERATURE

const AtomCoord * GetAtom(const AtomPntr &atom, bool getAny=false, bool suppressWarning=false) const

StyleManager::eDisplayStyle style

unsigned int GetAlignmentIndex(unsigned int row, unsigned int seqIndex, eUnalignedJustification justification)

int GetRowForSequence(const Sequence *sequence) const

double GetRelativeAlignmentFraction(unsigned int alignmentIndex) const

const Bond * previousVirtual

CCn3d_backbone_label_style –.

CCn3d_backbone_style –.

CCn3d_molecule_location –.

CCn3d_object_location –.

CCn3d_style_dictionary –.

CCn3d_style_settings –.

CCn3d_style_table_item –.

CCn3d_user_annotation –.

const Residue::AtomInfo * GetAtomInfo(const AtomPntr &atom) const

const Vector & Get(eColor which) const

double arrowTipWidthProportion

bool IsHighlighted(const Molecule *molecule, int residueID) const

void PostRedrawAllStructures(void)

void PostRedrawAllSequenceViewers(void)

static const int VALUE_NOT_SET

static const MoleculeIdentifier * FindIdentifier(int mmdbID, int moleculeID)

bool IsResidueInHelix(int residueID) const

std::vector< int > residueDomains

static const int NO_DOMAIN_SET

const MoleculeIdentifier * identifier

const Sequence * sequence

bool IsResidueInStrand(int residueID) const

unsigned int NResidues(void) const

bool IsSolvent(void) const

double arrowBaseWidthProportion

StyleManager::eDisplayStyle style

const Element * GetElement(int Z) const

bool IsNucleotide(void) const

const AtomInfo * GetAtomInfo(int aID) const

bool IsAminoAcid(void) const

int NAtomsInGraph(void) const

bool OverlayConfEnsembles(void) const

bool IsHidden(const StructureBase *entity) const

bool IsVisible(const StructureBase *entity) const

bool GetParentOfType(const T **ptr, bool warnIfNotFound=true) const

const ChemicalGraph * graph

AlignmentManager * alignmentManager

ShowHideManager * showHideManager

static const unsigned int eStyleData

void SetDataChanged(unsigned int what) const

bool LoadFromASNStyleDictionary(const ncbi::objects::CCn3d_style_dictionary &styleDictionary)

bool GetStrandStyle(const StructureObject *object, const Strand3D &strand, StrandStyle *strandStyle) const

void SetGlobalRenderingStyle(StyleSettings::ePredefinedRenderingStyle style)

bool CheckStyleSettings(StyleSettings *settings)

const StyleSettings & GetStyleForResidue(const StructureObject *object, int moleculeID, int residueID) const

UserAnnotation * AddUserAnnotation(void)

std::map< const MoleculeIdentifier *, std::vector< bool > > ResidueMap

bool RemoveUserStyle(int id)

bool DisplayUserAnnotation(UserAnnotation *annotation, bool display)

const StructureSet * structureSet

ncbi::objects::CCn3d_style_dictionary * CreateASNStyleDictionary(void) const

bool MoleculeHasUserStyle(const StructureObject *object, int moleculeID) const

bool GetObjectStyle(const StructureObject *object, const Object3D &object3D, const StyleSettings::GeneralStyle &generalStyle, ObjectStyle *objectStyle) const

bool GetAtomStyle(const Residue *residue, const AtomPntr &atom, const AtomCoord *coord, AtomStyle *atomStyle, const StyleSettings::BackboneStyle **saveBackboneStyle=NULL, const StyleSettings::GeneralStyle **saveGeneralStyle=NULL) const

bool GetHelixStyle(const StructureObject *object, const Helix3D &helix, HelixStyle *helixStyle) const

bool RemoveUserAnnotation(UserAnnotation *annotation)

bool GetBondStyle(const Bond *bond, const AtomPntr &atom1, const AtomCoord *coord1, const AtomPntr &atom2, const AtomCoord *coord2, double bondLength, BondStyle *bondStyle) const

bool AddUserStyle(int *id, StyleSettings **newStyle)

bool SaveToASNUserAnnotations(ncbi::objects::CCn3d_user_annotations *annotations) const

bool SetGlobalStyle(const ncbi::objects::CCn3d_style_settings &styleASN)

StyleSettings globalStyle

bool EditUserAnnotations(wxWindow *parent)

bool ResidueHasUserStyle(const StructureObject *object, int moleculeID, int residueID) const

const Vector & GetObjectColor(const Molecule *molecule) const

bool EditGlobalStyle(wxWindow *parent)

bool LoadFromASNUserAnnotations(const ncbi::objects::CCn3d_user_annotations &annotations)

StyleManager(const StructureSet *set)

bool MoveUserAnnotation(UserAnnotation *annotation, bool moveUp)

UserAnnotationList userAnnotations

bool CheckGlobalStyleSettings(void)

void SetGlobalColorScheme(StyleSettings::ePredefinedColorScheme scheme)

LabelStyle nucleotideLabels

GeneralStyle helixObjects

@ eWeightedVarietyShortcut

@ eInformationContentShortcut

@ eHydrophobicityShortcut

@ eSecondaryStructureShortcut

bool SaveSettingsToASN(ncbi::objects::CCn3d_style_settings *styleASN) const

GeneralStyle proteinSidechains

BackboneStyle nucleotideBackbone

bool LoadSettingsFromASN(const ncbi::objects::CCn3d_style_settings &styleASN)

GeneralStyle nucleotideSidechains

double spaceFillProportion

void SetDefaultLabeling(void)

void SetRenderingStyle(ePredefinedRenderingStyle style)

ePredefinedRenderingStyle

@ eToggleSidechainsShortcut

GeneralStyle strandObjects

BackboneStyle proteinBackbone

void SetColorScheme(ePredefinedColorScheme scheme)

StyleSettings & operator=(const StyleSettings &v)

Vector virtualDisulfideColor

void Set(double xs, double ys, double zs)

const Colors * GlobalColors(void)

Include a standard set of the NCBI C++ Toolkit most basic headers.

static DLIST_TYPE *DLIST_NAME() first(DLIST_LIST_TYPE *list)

static DLIST_TYPE *DLIST_NAME() last(DLIST_LIST_TYPE *list)

void swap(NCBI_NS_NCBI::pair_base_member< T1, T2 > &pair1, NCBI_NS_NCBI::pair_base_member< T1, T2 > &pair2)

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_SCOPE(ns)

Define a new scope.

void SetBall_radius(TBall_radius value)

Assign a value to Ball_radius data member.

TColor_scheme GetColor_scheme(void) const

Get the Color_scheme member data.

THydrogens_on GetHydrogens_on(void) const

Get the Hydrogens_on member data.

TIs_on GetIs_on(void) const

Get the Is_on member data.

const TNucleotide_backbone & GetNucleotide_backbone(void) const

Get the Nucleotide_backbone member data.

void SetStyle(TStyle value)

Assign a value to Style data member.

void SetBackground_color(TBackground_color &value)

Assign a value to Background_color data member.

ECn3d_drawing_style

atom/bond/object rendering styles for atoms and bonds

const TConnections & GetConnections(void) const

Get the Connections member data.

const TNucleotide_labels & GetNucleotide_labels(void) const

Get the Nucleotide_labels member data.

void SetScale_factor(TScale_factor value)

Assign a value to Scale_factor data member.

const TNucleotide_sidechains & GetNucleotide_sidechains(void) const

Get the Nucleotide_sidechains member data.

TWhite GetWhite(void) const

Get the White member data.

void SetStrand_width(TStrand_width value)

Assign a value to Strand_width data member.

void SetSpace_fill_proportion(TSpace_fill_proportion value)

Assign a value to Space_fill_proportion data member.

void SetStick_radius(TStick_radius value)

Assign a value to Stick_radius data member.

void SetNucleotide_labels(TNucleotide_labels &value)

Assign a value to Nucleotide_labels data member.

void SetUser_color(TUser_color &value)

Assign a value to User_color data member.

TNumber GetNumber(void) const

Get the Number member data.

void SetHeterogens(THeterogens &value)

Assign a value to Heterogens data member.

const TProtein_backbone & GetProtein_backbone(void) const

Get the Protein_backbone member data.

TGreen GetGreen(void) const

Get the Green member data.

list< CRef< CCn3d_object_location > > TResidues

TType GetType(void) const

Get the Type member data.

const TVirtual_disulfide_color & GetVirtual_disulfide_color(void) const

Get the Virtual_disulfide_color member data.

ECn3d_color_scheme

available color schemes (not all necessarily applicable to all objects)

const TSolvents & GetSolvents(void) const

Get the Solvents member data.

TType GetType(void) const

Get the Type member data.

TTermini GetTermini(void) const

Get the Termini member data.

void SetWhite(TWhite value)

Assign a value to White data member.

void SetTermini(TTermini value)

Assign a value to Termini data member.

TRed GetRed(void) const

Get the Red member data.

TStyle GetStyle(void) const

Get the Style member data.

void SetSolvents(TSolvents &value)

Assign a value to Solvents data member.

const TUser_color & GetUser_color(void) const

Get the User_color member data.

void SetProtein_sidechains(TProtein_sidechains &value)

Assign a value to Protein_sidechains data member.

void SetColor_scheme(TColor_scheme value)

Assign a value to Color_scheme data member.

TStyle GetStyle(void) const

Get the Style member data.

void SetType(TType value)

Assign a value to Type data member.

const TUser_color & GetUser_color(void) const

Get the User_color member data.

const TProtein_labels & GetProtein_labels(void) const

Get the Protein_labels member data.

void SetNucleotide_backbone(TNucleotide_backbone &value)

Assign a value to Nucleotide_backbone data member.

TIon_labels GetIon_labels(void) const

Get the Ion_labels member data.

const THeterogens & GetHeterogens(void) const

Get the Heterogens member data.

const THelix_objects & GetHelix_objects(void) const

Get the Helix_objects member data.

TStrand_width GetStrand_width(void) const

Get the Strand_width member data.

void SetVirtual_disulfides_on(TVirtual_disulfides_on value)

Assign a value to Virtual_disulfides_on data member.

ECn3d_backbone_type

values of enumerations must match those in cn3d/style_manager.hpp! for different types of backbones

TTube_worm_radius GetTube_worm_radius(void) const

Get the Tube_worm_radius member data.

void SetVirtual_disulfide_color(TVirtual_disulfide_color &value)

Assign a value to Virtual_disulfide_color data member.

void SetHelix_objects(THelix_objects &value)

Assign a value to Helix_objects data member.

TBlue GetBlue(void) const

Get the Blue member data.

bool IsSetNucleotide_labels(void) const

Check if a value has been assigned to Nucleotide_labels data member.

void SetTube_worm_radius(TTube_worm_radius value)

Assign a value to Tube_worm_radius data member.

TStick_radius GetStick_radius(void) const

Get the Stick_radius member data.

bool IsSetProtein_labels(void) const

backbone labels (no labels if not present) Check if a value has been assigned to Protein_labels data ...

const TStyle_table & GetStyle_table(void) const

Get the Style_table member data.

TTube_radius GetTube_radius(void) const

Get the Tube_radius member data.

void SetColor_scheme(TColor_scheme value)

Assign a value to Color_scheme data member.

void SetProtein_backbone(TProtein_backbone &value)

Assign a value to Protein_backbone data member.

void SetConnections(TConnections &value)

Assign a value to Connections data member.

void SetNucleotide_sidechains(TNucleotide_sidechains &value)

Assign a value to Nucleotide_sidechains data member.

void SetHydrogens_on(THydrogens_on value)

Assign a value to Hydrogens_on data member.

TColor_scheme GetColor_scheme(void) const

Get the Color_scheme member data.

void SetNumber(TNumber value)

Assign a value to Number data member.

void SetType(TType value)

Assign a value to Type data member.

bool IsSetStyle_table(void) const

Check if a value has been assigned to Style_table data member.

void SetProtein_labels(TProtein_labels &value)

Assign a value to Protein_labels data member.

TSpace_fill_proportion GetSpace_fill_proportion(void) const

Get the Space_fill_proportion member data.

bool IsSetIon_labels(void) const

ion labels Check if a value has been assigned to Ion_labels data member.

const TBackground_color & GetBackground_color(void) const

Get the Background_color member data.

void SetStyle(TStyle value)

Assign a value to Style data member.

TVirtual_disulfides_on GetVirtual_disulfides_on(void) const

Get the Virtual_disulfides_on member data.

THelix_radius GetHelix_radius(void) const

Get the Helix_radius member data.

TStrand_thickness GetStrand_thickness(void) const

Get the Strand_thickness member data.

const TStrand_objects & GetStrand_objects(void) const

Get the Strand_objects member data.

void SetSpacing(TSpacing value)

Assign a value to Spacing data member.

void SetTube_radius(TTube_radius value)

Assign a value to Tube_radius data member.

TSpacing GetSpacing(void) const

Get the Spacing member data.

void SetHelix_radius(THelix_radius value)

Assign a value to Helix_radius data member.

TScale_factor GetScale_factor(void) const

Get the Scale_factor member data.

void SetStrand_objects(TStrand_objects &value)

Assign a value to Strand_objects data member.

void SetIon_labels(TIon_labels value)

Assign a value to Ion_labels data member.

void SetIs_on(TIs_on value)

Assign a value to Is_on data member.

void SetStrand_thickness(TStrand_thickness value)

Assign a value to Strand_thickness data member.

TScale_factor GetScale_factor(void) const

Get the Scale_factor member data.

const TProtein_sidechains & GetProtein_sidechains(void) const

Get the Protein_sidechains member data.

const TGlobal_style & GetGlobal_style(void) const

Get the Global_style member data.

void SetUser_color(TUser_color &value)

Assign a value to User_color data member.

where boath are integers</td > n< td ></td > n</tr > n< tr > n< td > tse</td > n< td > optional</td > n< td > String</td > n< td class=\"description\"> TSE option controls what blob is orig

Messenger * GlobalMessenger(void)

Portable reference counted smart and weak pointers using CWeakRef, CRef, CObject and CObjectEx.

bool le(T x_, T y_, T round_)

double r(size_t dimension_, const Int4 *score_, const double *prob_, double theta_)

PeriodicTableClass PeriodicTable

bool IsMetal(int atomicNumber)

static SLJIT_INLINE sljit_ins l(sljit_gpr r, sljit_s32 d, sljit_gpr x, sljit_gpr b)

StyleManager::eDisplayStyle style

eAtomClassification classification

static bool SaveLabelStyleToASN(const StyleSettings::LabelStyle lSettings, CCn3d_backbone_label_style *lASN)

static bool ExtractObjectLocation(StyleManager::ResidueMap *residueMap, const CCn3d_user_annotation::TResidues &residuesASN)

double GetHydrophobicity(char code)

const double UNKNOWN_HYDROPHOBICITY

static bool LoadBackboneStyleFromASN(const CCn3d_backbone_style &bbASN, StyleSettings::BackboneStyle *bbSettings)

static bool LoadGeneralStyleFromASN(const CCn3d_general_style &gASN, StyleSettings::GeneralStyle *gSettings)

static bool SetBondStyleFromResidueStyle(StyleSettings::eDrawingStyle style, const StyleSettings &settings, BondStyle::EndStyle *end)

static bool CreateObjectLocation(CCn3d_user_annotation::TResidues *residuesASN, const StyleManager::ResidueMap &residueMap)

#define ATOM_NOT_DISPLAYED

static void Vector2ASNColor(const Vector &vec, CCn3d_color *asnColor)

#define BOND_NOT_DISPLAYED

static bool SaveGeneralStyleToASN(const StyleSettings::GeneralStyle gSettings, CCn3d_general_style *gASN)

static bool LoadLabelStyleFromASN(const CCn3d_backbone_label_style &lASN, StyleSettings::LabelStyle *lSettings)

static void ASNColor2Vector(const CCn3d_color &asnColor, Vector *vec)

static bool SaveBackboneStyleToASN(const StyleSettings::BackboneStyle bbSettings, CCn3d_backbone_style *bbASN)

static void SetDefaultLabelStyle(StyleSettings::LabelStyle *lStyle)

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