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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/structSLongPatternItems.html below:

NCBI C++ ToolKit: SLongPatternItems Struct Reference

Search Toolkit Book for SLongPatternItems

Auxiliary items needed for a PHI BLAST search with pattern containing multiple words. More...

#include <algo/blast/core/pattern.h>

Auxiliary items needed for a PHI BLAST search with pattern containing multiple words.

Definition at line 131 of file pattern.h.

◆ bitPatternByLetter Int4 SLongPatternItems::bitPatternByLetter[256][11] ◆ dna_items ◆ extra_long_items ◆ inputPatternMasked Int4 SLongPatternItems::inputPatternMasked[(30 * 11)] ◆ match_maskL Int4 SLongPatternItems::match_maskL[100] ◆ numWords Int4 SLongPatternItems::numWords ◆ SLL Int4 SLongPatternItems::SLL[100][256]

The documentation for this struct was generated from the following file:


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