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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/structBlastSeqSrcSetRangesArg.html below:

NCBI C++ ToolKit: BlastSeqSrcSetRangesArg Struct Reference

Search Toolkit Book for BlastSeqSrcSetRangesArg

Structure used as the argument to function SetRanges. More...

#include <algo/blast/core/blast_seqsrc.h>

Public Attributes Int4  oid   Oid in BLAST database, index in an array of sequences, etc [in]. More...
  Int4  capacity   initial allocation More...
  Int4  num_ranges   Number of actual ranges contained. More...
  Int4ranges   Ranges in sorted order [in]. More...
  Detailed Description

Structure used as the argument to function SetRanges.

Definition at line 208 of file blast_seqsrc.h.

Member Data Documentation ◆ capacity Int4 BlastSeqSrcSetRangesArg::capacity

initial allocation

Definition at line 213 of file blast_seqsrc.h.

Referenced by BlastSeqSrcSetRangesArgAddRange(), and BlastSeqSrcSetRangesArgNew().

◆ num_ranges Int4 BlastSeqSrcSetRangesArg::num_ranges

Number of actual ranges contained.

Definition at line 216 of file blast_seqsrc.h.

Referenced by BlastSeqSrcSetRangesArgAddRange(), BlastSeqSrcSetRangesArgBuild(), BlastSeqSrcSetRangesArgNew(), BOOST_AUTO_TEST_CASE(), s_SeqDbGetSequence(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().

◆ oid Int4 BlastSeqSrcSetRangesArg::oid

Oid in BLAST database, index in an array of sequences, etc [in].

Definition at line 210 of file blast_seqsrc.h.

Referenced by BLAST_SetupPartialFetching(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().

◆ ranges Int4* BlastSeqSrcSetRangesArg::ranges

Ranges in sorted order [in].

Definition at line 219 of file blast_seqsrc.h.

Referenced by BlastSeqSrcSetRangesArgAddRange(), BlastSeqSrcSetRangesArgBuild(), BlastSeqSrcSetRangesArgFree(), BlastSeqSrcSetRangesArgNew(), BOOST_AUTO_TEST_CASE(), s_SeqDbGetSequence(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().

The documentation for this struct was generated from the following file:


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