Search Toolkit Book for BlastSeqSrcSetRangesArg
Structure used as the argument to function SetRanges. More...
#include <algo/blast/core/blast_seqsrc.h>
Structure used as the argument to function SetRanges.
Definition at line 208 of file blast_seqsrc.h.
Member Data Documentation ◆ capacity Int4 BlastSeqSrcSetRangesArg::capacityinitial allocation
Definition at line 213 of file blast_seqsrc.h.
Referenced by BlastSeqSrcSetRangesArgAddRange(), and BlastSeqSrcSetRangesArgNew().
◆ num_ranges Int4 BlastSeqSrcSetRangesArg::num_rangesNumber of actual ranges contained.
Definition at line 216 of file blast_seqsrc.h.
Referenced by BlastSeqSrcSetRangesArgAddRange(), BlastSeqSrcSetRangesArgBuild(), BlastSeqSrcSetRangesArgNew(), BOOST_AUTO_TEST_CASE(), s_SeqDbGetSequence(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().
◆ oid Int4 BlastSeqSrcSetRangesArg::oidOid in BLAST database, index in an array of sequences, etc [in].
Definition at line 210 of file blast_seqsrc.h.
Referenced by BLAST_SetupPartialFetching(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().
◆ ranges Int4* BlastSeqSrcSetRangesArg::rangesRanges in sorted order [in].
Definition at line 219 of file blast_seqsrc.h.
Referenced by BlastSeqSrcSetRangesArgAddRange(), BlastSeqSrcSetRangesArgBuild(), BlastSeqSrcSetRangesArgFree(), BlastSeqSrcSetRangesArgNew(), BOOST_AUTO_TEST_CASE(), s_SeqDbGetSequence(), s_SeqDbSetRanges(), and s_VDBSRC_SetSeqRange().
The documentation for this struct was generated from the following file:
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