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NCBI C++ ToolKit: src/algo/blast/dbindex_search/srsearch/srsearch_app.cpp File Reference

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Definition at line 359 of file srsearch_app.cpp.

Referenced by add_number(), AddOrgmod(), CTableAnnotDataSource::AddSnpSeqLoc(), BOOST_AUTO_TEST_CASE(), CGraphUtils::CalcGraphLevels(), CAutoRegistrar::CAutoRegistrar(), CheckDuplicates(), CheckHost(), CSimpleDataLoaderFactory< TDataLoader >::CreateAndRegister(), CAsnCache_DataLoaderCF::CreateAndRegister(), CBlastDb_DataLoaderCF::CreateAndRegister(), CRmtBlastDb_DataLoaderCF::CreateAndRegister(), CCDD_DataLoaderCF::CreateAndRegister(), CGB_DataLoaderCF::CreateAndRegister(), CPSG_DataLoaderCF::CreateAndRegister(), CLDS2_DataLoaderCF::CreateAndRegister(), CDLPatcher_DataLoaderCF::CreateAndRegister(), CBAM_DataLoaderCF::CreateAndRegister(), CCSRA_DataLoaderCF::CreateAndRegister(), CSNP_DataLoaderCF::CreateAndRegister(), CSRA_DataLoaderCF::CreateAndRegister(), CVDBGraph_DataLoaderCF::CreateAndRegister(), CWGS_DataLoaderCF::CreateAndRegister(), CDataLoaderFactory::CreateInstance(), CTableAnnotDataSource::CreateSnpFeature(), CTableAnnotDataSource::CreateSnps(), ExtractSeqVector(), FixHumanHost(), CSeqFetchQueue::GetInstance(), GetVDBScope(), CColumnValidator::IsDiscouraged(), main(), NCBITEST_AUTO_INIT(), CBDB_ExtBlobStore< TBV >::Open(), pcre2grep(), CWinMaskCountsGenerator::process(), CDemoHook::ReadChoiceVariant(), CReadCMHook_Date_std__year::ReadClassMember(), CDemoHook::ReadClassMember(), CAutoRegistrar::RegisterGenbankDataLoader(), CDataLoader::RegisterInObjectManager(), CCDDDataLoader::RegisterInObjectManager(), CPSGDataLoader::RegisterInObjectManager(), CLDS2_DataLoader::RegisterInObjectManager(), CSRADataLoader::RegisterInObjectManager(), CVDBGraphDataLoader::RegisterInObjectManager(), CGBDataLoader_Native::RegisterInObjectManager(), CBAMDataLoader::RegisterInObjectManager(), CCSRADataLoader::RegisterInObjectManager(), CSNPDataLoader::RegisterInObjectManager(), CWGSDataLoader::RegisterInObjectManager(), CSplitDataLoader::RegisterInObjectManager(), CAsnCache_DataLoader::RegisterInObjectManager(), CBlastDbDataLoader::RegisterInObjectManager(), CRemoteBlastDbDataLoader::RegisterInObjectManager(), CHugeAsnDataLoader::RegisterInObjectManager(), CGBDataLoader::RegisterInObjectManager(), CDataLoaderPatcher::RegisterInObjectManager(), CBuffer_DataLoader::RegisterInObjectManager(), RegisterOMDataLoader(), CdBlaster::RemoveAllDataLoaders(), CSimpleB2SWrapper::RemoveAllDataLoaders(), RemoveAllDataLoaders(), CAutoRegistrar::RemoveAllDataLoaders(), CNgAlignApp::Run(), CSRSearchApplication::Run(), CIdMapperTestApp::Run(), CAgpFastaComparator::Run(), CAlignCleanupApplication::Run(), CTestCompartApplication::Run(), CDemoScoreBuilderApp::Run(), CGeneModelDemoApp::Run(), CWinMaskDemoApplication::Run(), CPrimeCacheApplication::Run(), CAsnSubCacheCreateApplication::Run(), CDustMaskApplication::Run(), CIdfetchApplication::Run(), CWinMaskApplication::Run(), s_OrgModToSlot(), s_RegisterLocalDataLoader(), s_RegisterOMDataLoader(), s_UnregisterDataLoader(), CElementaryMatching::SetOutputMethod(), TestBulkSpecificHostFixList(), CValidError_imp::ValidateBioSourceForSeq(), CDemoHook_std::WriteChoiceVariant(), CDemoHook_str::WriteChoiceVariant(), CDemoHook::WriteClassMember(), CPrimeCacheApplication::x_CacheSeqEntry(), CSNPSearchJob::x_DoSearch(), CEntrezSearchJob::x_DoSearch(), CTableDataValidateJob::x_FetchAll(), CSrcModListPanel::x_FillDataList(), CDataLoaderFactory::x_GetObjectManager(), CAppHitFilter::x_LoadConstraints(), CPrimeCacheApplication::x_Process_Fasta(), and CAutoRegistrar::~CAutoRegistrar().

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