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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/splign__params_8cpp_source.html below:

void SetFrame(const string &frame)

void Log(const string &name, const char *value, CDebugDumpFormatter::EValueType type=CDebugDumpFormatter::eValue, const string &comment=kEmptyStr)

CRegistryWriteView GetWriteView(const string &section)

get a read-write view at a particular level.

static CGuiRegistry & GetInstance()

access the application-wide singleton

CRegistryReadView GetReadView(const string &section) const

get a read-only view at a particular level.

class CRegistryReadView provides a nested hierarchical view at a particular key.

int GetInt(const string &key, int default_val=0) const

access a named key at this level, with no recursion

double GetReal(const string &key, double default_val=0) const

bool GetBool(const string &key, bool default_val=false) const

void Set(const string &key, int val)

access a named key at this level, with no recursion

void Copy(const CSplignParams &data)

bool operator==(const CSplignParams &data) const

void operator=(const CSplignParams &data)

virtual void LoadSettings()

virtual void DebugDump(CDebugDumpContext ddc, unsigned int depth) const

virtual void SaveSettings() const

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static const char * kDiscType

static const char * kPolyADetectTag

static const char * kMaxIntron

static const char * kCompPenaltyTag

static const char * kMinExonIdentityTag

static const char * kMaxGenomicExtentTag

static const char * kMinCompIdentityTag

static const char * kEndGapDetectTag

static const char * kcDNA_strandTag

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