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static EAccessionInfo IdentifyAccession(const CTempString &accession, TParseFlags flags=fParse_AnyRaw)
Deduces information from a bare accession a la WHICH_db_accession; may report false negatives on prop...
CConstRef< CSeq_id > GetSeqId(void) const
EAccessionInfo
For IdentifyAccession (below)
@ eAcc_refseq_mrna_predicted
@ eAcc_refseq_wgs_intermed
const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)
If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...
const CMolInfo * GetMolInfo(const CBioseq &bioseq)
Retrieve the MolInfo object for a given bioseq handle.
@ eGetId_Best
return the "best" gi (uses FindBestScore(), with CSeq_id::CalculateScore() as the score function
uint32_t Uint4
4-byte (32-bit) unsigned integer
#define END_NCBI_SCOPE
End previously defined NCBI scope.
#define END_SCOPE(ns)
End the previously defined scope.
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
#define BEGIN_SCOPE(ns)
Define a new scope.
@ eBiomol_pre_RNA
precursor RNA of any sort really
@ eBiomol_cRNA
viral RNA genome copy intermediate
@ eBiomol_snoRNA
small nucleolar RNA
Uint4 GetSequenceType(const CBioseq_Handle &bsh)
Return a (corrected) set of flags identifying the sequence type.
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