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NCBI C++ ToolKit: src/util/sequtil/sequtil_shared.cpp File Reference

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SIZE_TYPE  convert_1_to_1 (const char *src, TSeqPos pos, TSeqPos length, char *dst, const Uint1 *table)   SIZE_TYPE  convert_1_to_2 (const char *src, TSeqPos pos, TSeqPos length, char *dst, const Uint1 *table)   SIZE_TYPE  convert_1_to_4 (const char *src, TSeqPos pos, TSeqPos length, char *dst, const Uint1 *table)   SIZE_TYPE  copy_1_to_1_reverse (const char *src, TSeqPos pos, TSeqPos length, char *dst, const Uint1 *table)   SIZE_TYPE  revcmp (char *buf, TSeqPos pos, TSeqPos length, const Uint1 *table)   size_t  GetBasesPerByte (CSeqUtil::TCoding coding)   SIZE_TYPE  GetBytesNeeded (CSeqUtil::TCoding coding, TSeqPos length)   ◆ convert_1_to_1()

Definition at line 41 of file sequtil_shared.cpp.

References table.

Referenced by CSeqManip::Complement(), CSeqConvert_imp::Subseq(), CSeqConvert_imp::x_Convert2naExpandTo8na(), CSeqConvert_imp::x_Convert2naExpandToIupacna(), CSeqConvert_imp::x_Convert8naTo2naExpand(), CSeqConvert_imp::x_Convert8naToIupacna(), CSeqConvert_imp::x_ConvertEaaToIupacaa(), CSeqConvert_imp::x_ConvertEaaToStdaa(), CSeqConvert_imp::x_ConvertIupacaaToStdaa(), CSeqConvert_imp::x_ConvertIupacnaTo2naExpand(), CSeqConvert_imp::x_ConvertIupacnaTo8na(), CSeqConvert_imp::x_ConvertIupacnaToIupacna(), CSeqConvert_imp::x_ConvertStdaaToEaa(), and CSeqConvert_imp::x_ConvertStdaaToIupacaa().

◆ convert_1_to_2() ◆ convert_1_to_4() ◆ copy_1_to_1_reverse() ◆ GetBasesPerByte() ◆ GetBytesNeeded() ◆ revcmp()

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