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NCBI C++ ToolKit: src/gui/widgets/seq_graphic/seqgraphic_pane.hpp Source File

(wxKeyEvent& event);

(wxMouseEvent& event);

(wxMouseEvent& event);

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& tip_id,

wxRect& tip_rect);

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& tip_id,

wxRect&

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CCachedTipHandle(const string &t_name, objects::CScope &scope)

const string & GetParentTrackName() const

bool HasMatches(const CObject &object, objects::CScope &scope) const

CEvent - generic event implementation TODO TODO - Attachments.

CLayoutTrackHandler - is the handler for handling the user interactions on layout tracks.

Class CLinearSelHandler represents in GUI a one-dimnesional multi-segment selection.

Help class to manage markers.

void SetColor(const CRgbaColor &color)

void SetMarkerType(CSeqMarkHandler::EMarkerType t)

void SetExtendedPos(TModelUnit pos)

void Render(CGlPane &pane, CSeqMarkHandler::ERenderingOption option)

TSeqPos GetExtendedPos() const

const CRgbaColor & GetColor() const

void SetRange(TSeqRange range)

CSeqMarkHandler m_Handler

const string & GetLabel() const

void SetPos(TModelUnit pos)

CSeqMarkHandler::EMarkerType GetMarkerType() const

void SetLabel(const string &label)

CMouseZoomHandler provides support for mouse-driven zoom and pan operations.

void Clear(objects::CScope *scope)

bool HasMatches(const CObject &object, objects::CScope &scope) const

void Add(ISelObjectHandle *obj_handle, CObject &obj)

class CRgbaColor provides a simple abstraction for managing colors.

class CSeqGlyph defines an interface that wraps a rectilinear abstract object.

list< CRef< CSeqGlyph > > TObjects

CConstRef< CSeqGlyph > x_GetOnlyOneSelectedGlyph()

virtual void SMHH_SetSeqMark(TSeqPos mark) override

The derived class may choose do something differently when marker position is changed.

void OnTipRemoved(const string &tip_id)

string GetMarkers() const

get/set markers stored as a string.

void OnTipAdded(const string &tip_id)

void x_RemoveMarker(const string &id)

virtual TModelUnit SMHH_GetModelByWindow(int z, EOrientation orient) override

CSeqMarkHandler & x_GetDefaultMarker()

CConstRef< CSeqGlyph > GetSelectedLayoutObj()

map< string, CRef< CMarker > > TSeqMarkers

void OnMiddleDown(wxMouseEvent &event)

void NextPrevSplice(EDirection dir)

CRef< CSeqGraphicConfig > m_ConfigSettings

void x_RenderTooltipConnector()

CSeqGraphicWidget * x_GetParent()

virtual void LTH_OnLayoutChanged() override

provides mouse coords in OpenGL viewport coord system

virtual void MZHH_SetScale(TModelUnit scale, const TModelPoint &point) override

void ExpandAllTracks(bool expand)

@ eMouse_Idle

no button down

@ eMouse_RectSelect

with SHIFT key down

@ eMouse_IncRectSelect

with SHIFT and CTRL key down

@ eMouse_IncSelect

with CTRL key down

@ eMouse_Pan

left click and drag

@ eMouse_Down

left button down, not sure what to do yet

string GetNewMarkerName()

const TRangeColl & GetRangeSelection(void) const

virtual void UpdateVectorLayout() override

CConstRef< CMarker > GetMarker(const string &id)

TModelUnit GetHeight()

class CSeqGraphicPane

virtual ~CSeqGraphicPane()

virtual TModelPoint THH_GetModelByWindow(const wxPoint &pt) override

void SetRangeSelection(const TRangeColl &ranges)

void x_NotifyWidgetRangeChanged()

CTooltipInfo m_TooltipInfo

bool CanGoBack(void) const

virtual void MZHH_ZoomRect(const TModelRect &rc) override

virtual void PostDialogShow() override

Post-processing after showing a dialog.

CSeqGraphicPane(CSeqGraphicWidget *parent)

void SelectOnlyThisObject(const CSeqGlyph *glyph, int mouse_x, int mouse_y)

virtual const TVPRect & GetViewportRect() const override

virtual TVPUnit MZHH_GetVPPosByY(int y) const override

converts window coord to Viewport coord

void OnMouseCaptureLost(wxMouseCaptureLostEvent &)

void RemoveMarker(const string &marker_id)

void x_NotifyWidgetSelChanged()

void InitDataSource(SConstScopedObject &obj)

void SetViewportWidth(TSeqPos from, TSeqPos to, TVPUnit vp_width)

const CSeqGraphicWidget * x_GetParent() const

void SelectSeqLoc(const objects::CSeq_loc *loc)

TSeqRange FindText(const string &text, bool match_case)

bool CanGoForward(void) const

bool AllJobsFinished() const

virtual void SMHH_OnReset(const string &id) override

The derived class may need to do something differently when a marker gets reset, such as remove the m...

void AddPointMarker(const string &name, TSeqPos pos, const CRgbaColor color)

void GetFeatureNames(vector< string > &names)

void x_ChangeSwitchPoint()

void AdjustViewPort()

Potential actions include loading data and generating layouts.

void GetObjectSelection(TConstObjects &objs) const

retrieve the selections from our renderer.

CRef< CSeqGraphicConfig > GetConfig()

virtual void LTH_ZoomOnRange(const TSeqRange &range) override

notifies the host we need to zoom on to a range.

string GetHitMarker() const

CWeakRef< CSeqGlyph > x_GetGlyphByTipId(const string &tip_id)

void SetSeqStart(TSeqPos pos)

void SetInputObject(SConstScopedObject &obj)

void SetSeqStartMarker(const string &id)

bool IsHorizontal() const

void SetSeqStartPoint(TModelPoint point)

virtual void LTH_PopupMenu(wxMenu *menu) override

show track-specific context menu.

void x_RenderRectSelHandler(CGlPane &pane)

Rectangular selection.

void SetVectorMode(bool b)

@)

virtual void PreDialogShow() override

Prepare for showing a dialog.

bool m_VectorPane

If true pane is only for creating vector graphics - ignore other draw events.

CWeakRef< CSeqGlyph > m_LastHitGlyph

last hit glyph.

virtual void x_Render() override

Draw the GL window.

CRef< CSGSequenceDS > m_DS

void OnMouseWheel(wxMouseEvent &event)

const TSeqMarkers & GetAllMarkers() const

int m_MarkerHandlerIndex

Marker handler index among all registered handlers.

void SetHorizontal(bool b_horz, bool b_flip)

virtual void ResetSearch() override

TRangeVec m_BackForwardHistory

void OnLeftDblClick(wxMouseEvent &event)

void UpdateConfig()

the config object just changed. Do what is necessary.

bool AllTracksCreated() const

virtual TModelUnit MZHH_GetScale(EScaleType type) override

CMouseZoomHandler m_MouseZoomHandler

void ResetObjectSelection()

virtual void Update(void) override

void GetCurrentObject(int mouse_x, int mouse_y, TConstObjects &objs)

void SelectObject(const CObject *obj, bool verified)

virtual void MZHH_ZoomPoint(const TModelPoint &point, TModelUnit factor) override

CRef< CSeqGraphicRenderer > m_Renderer

virtual void LTH_PushEventHandler(wxEvtHandler *handler) override

CStickyTooltipHandler m_TooltipManager

void AdjustViewPortHeightToImage()

bool m_Title

When rendering vector image, add a title.

virtual CTooltipInfo TTHH_GetTooltip(const wxRect &rect) override

Return the contents to be displayed in the tool tip.

void OnScrollEnd(wxScrollEvent &event)

TSeqPos GetSeqStart() const

void ShowAllTracks(bool shown)

virtual void AddTitle(bool b) override

void x_OnPurgeMarkers(CEvent *)

CFeaturePanel * GetFeaturePanel()

void SetExternalGlyphs(const CSeqGlyph::TObjects &objs)

CSGSequenceDS * GetDataSource(void)

virtual int x_GetAreaByVPPos(int vp_x, int vp_y) override

void ResetRangeSelection()

virtual void LTH_ConfigureTracksDlg(const string &category) override

void OnKeyUp(wxKeyEvent &event)

void SaveCurrentRange()

For Back or Forward operations.

void OnLeftUp(wxMouseEvent &event)

bool x_HasDefaultMarker() const

void ModifyMarker(const string &id, const string &label, TSeqPos pos, const CRgbaColor color)

virtual void MZHH_EndOp() override

size_t GetMarkerNum() const

virtual void MZHH_Scroll(TModelUnit d_x, TModelUnit d_y) override

virtual TModelUnit SHH_GetModelByWindow(int z, EOrientation orient) override

virtual TVPPoint GetPortSize(void) override

Get GL view port size.

map< string, CRef< CCachedTipHandle > > TPinnedTips

virtual TSeqPos SMHH_GetSeqMark() const override

If the host needs to dictate/store the marker position, then it needs to return a non (TSeqPos)-1 val...

virtual void SHH_OnChanged() override

ISelHandlerHost implementation.

size_t m_BackForwardPos

position in m_BackForwardHistory

CIRef< ISGDataSourceContext > m_DSContext

bool x_ModifyMarker(CRef< CMarker > &marker, const string &id, const string &label, const CRgbaColor color)

CLinearSelHandler::TRangeColl TRangeColl

virtual CRef< CLayoutTrack > THH_GetLayoutTrack() override

Get the layout track under the current mouse position.

virtual bool TTHH_ProcessURL(const wxString &href) override

Return true if the specified URL has been processed. Used for custom commands.

void DeSelectObject(const CObject *obj)

void SelectLastHitObject(int mouse_x, int mouse_y)

virtual string TTHH_NeedTooltip(const wxPoint &pt) override

Return id of the underlying element to dispaly a tooltip, otherwise "".

vector< TSeqRange > TRangeVec

@ }

CLayoutTrackHandler m_TrackHandler

void OnSearchTip(const string &tip_id, const wxRect &tip_rect)

void OnLeftDown(wxMouseEvent &event)

int GetPopupArea(wxPoint pos)

void OnZoomTip(const string &tip_id, const wxRect &)

void OnKeyDown(wxKeyEvent &event)

virtual void RenderVectorGraphics(int vp_width, int vp_height) override

Render for vector output.

void SetMarkers(const string &markers)

virtual void LTH_PopEventHandler() override

string x_GetCachedTipId(const CSeqGlyph *glyph) const

bool CanZoomSelection(void)

void SetSeqMarker(TModelPoint point)

CLinearSelHandler m_SelHandler

void OnKillFocus(wxFocusEvent &event)

void SetNonAsnInput(const INonAsnTrackData &data)

void OnInfoTip(const string &)

void RenameMarker(const string &id, const string &label)

void x_AddNewMarker(CRef< CMarker > marker, const string &label, const CRgbaColor &color)

void OnMotion(wxMouseEvent &event)

void AddRangeMarker(const string &name, TSeqRange range, const CRgbaColor color)

void SetActivatedTip(const string &id)

void OnContextMenu(wxContextMenuEvent &event)

virtual TVPUnit SHH_GetWindowByModel(TModelUnit z, EOrientation orient) override

void UpdateData(TSeqPos from, TSeqPos to)

void ShowAllTracks(bool shown)

void ExpandAllTracks(bool expand)

Class CSeqMarkHandler represents in GUI a single "hairpin" on a sequence bar.

const CRgbaColor & GetColor() const

void SetMarkerType(EMarkerType t)

void Render(CGlPane &Pane, ERenderingOption option)

const string & GetLabel() const

TSeqPos GetExtendedPos() const

EMarkerType GetMarkerType() const

void SetLabel(const string &label)

void SetRange(TSeqRange range)

void SetColor(const CRgbaColor &color)

void SetPos(TModelUnit pos)

void SetFlipped(bool flipped)

void SetExtendedPos(TModelUnit pos)

IGlyphDialogHost An interface used for handling issues related to any dialog pops up that requires so...

ILayoutTrackHost An interface used for handling GUI-related events, such as layout change event that ...

Interface IMouseZoomHandlerHost represents a context in which CMouseZoomHandler functions.

class ISeqMarkHandlerHost

ITrackHandlerHost ITrackHandlerHost represents a context for handling the user interactions on a layo...

Interface class for the pdf renderer.

void(*)(CSeq_entry_Handle seh, IWorkbench *wb, const CSerialObject &obj) handler

static const struct name_t names[]

unsigned int TSeqPos

Type for sequence locations and lengths.

vector< CConstRef< CObject > > TConstObjects

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static const char label[]

static void text(MDB_val *v)

Standard mechanism to include OpenGL headers for all platforms.

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