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NCBI C++ ToolKit: src/objmgr/seq_table_setters.cpp Source File

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.GetChoiceTypeInfo()->GetVariantInfo(index)

obj = (*it)->GetNextObject(obj);

obj = (*it)->GetNextObject(obj);

obj = (*it)->GetNextObject(obj);

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Annotation iterators exceptions.

@Gb_qual.hpp User-defined methods of the data storage class.

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

TMemberIndex m_VariantIndex

TMemberIndex m_MemberIndex

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

virtual CObjectInfo GetNextObject(const CObjectInfo &obj) const

virtual void SetBytes(CSeq_feat &feat, const vector< char > &value) const

CSeqTableSetAnyFeatField(const CTempString &field)

virtual void SetReal(CSeq_feat &feat, double value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetInt8(CSeq_feat &feat, Int8 value) const

virtual void SetInt(CSeq_feat &feat, int value) const

virtual void SetString(CSeq_loc &loc, const string &value) const

virtual void SetReal(CSeq_loc &loc, double value) const

virtual void SetBytes(CSeq_loc &loc, const vector< char > &value) const

virtual void SetInt(CSeq_loc &loc, int value) const

CSeqTableSetAnyLocField(const CTempString &field)

virtual void SetInt8(CSeq_loc &loc, Int8 value) const

CSeqTableSetAnyObjField(CObjectTypeInfo type, CTempString field)

vector< CConstRef< CSeqTableNextObject > > TNexters

void SetObjectField(CObjectInfo obj, int value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetInt(CSeq_feat &feat, int value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetInt8(CSeq_feat &feat, Int8 value) const

virtual void SetInt8(CSeq_feat &feat, Int8 value) const

virtual void SetInt(CSeq_feat &feat, int value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetBytes(CSeq_feat &feat, const vector< char > &value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetInt8(CSeq_feat &feat, Int8 value) const

virtual void SetInt(CSeq_feat &feat, int value) const

vector< string > TSubfields

CUser_field & x_SetField(CSeq_feat &feat) const

virtual void SetReal(CSeq_feat &feat, double value) const

CSeqTableSetExt(const CTempString &name)

virtual void SetString(CSeq_feat &feat, const string &value) const

virtual void SetInt8(CSeq_feat &feat, Int8 value) const

virtual void SetBytes(CSeq_feat &feat, const vector< char > &value) const

virtual void SetReal(CSeq_feat &feat, double value) const

virtual void SetInt(CSeq_feat &feat, int value) const

virtual void SetInt8(CSeq_loc &loc, Int8 value) const

virtual void SetInt(CSeq_loc &loc, int value) const

virtual void SetReal(CSeq_loc &loc, double value) const

virtual void SetString(CSeq_loc &loc, const string &value) const

virtual ~CSeqTableSetLocField()

virtual void SetInt(CSeq_loc &loc, int value) const

virtual void SetInt(CSeq_loc &loc, int value) const

virtual void SetString(CSeq_feat &feat, const string &value) const

namespace ncbi::objects::

CTempString implements a light-weight string on top of a storage buffer whose lifetime management is ...

static DLIST_TYPE *DLIST_NAME() next(DLIST_LIST_TYPE *list, DLIST_TYPE *item)

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define NON_CONST_ITERATE(Type, Var, Cont)

Non constant version of ITERATE macro.

#define NCBI_THROW_FMT(exception_class, err_code, message)

The same as NCBI_THROW but with message processed as output to ostream.

size_t TMemberIndex

Type used for indexing class members and choice variants.

const TMemberIndex kInvalidMember

Special value returned from FindMember.

static C * Get(const CTypesIterator &it)

CObjectInfo AddNewPointedElement(void) const

add new pointer element, create new pointed object and return it

TObjectPtr GetObjectPtr(void) const

Get pointer to object.

const CPrimitiveTypeInfo * GetPrimitiveTypeInfo(void) const

CObjectInfo AddNewElement(void) const

Add and return new element object.

CObjectInfo SetChoiceVariant(TMemberIndex index) const

Select choice variant, if necessary, and return variant object.

CObjectInfo SetClassMember(TMemberIndex index) const

Create member if necessary and return member object.

CObjectInfo SetPointedObject(void) const

Create if necessary and return pointed object.

int64_t Int8

8-byte (64-bit) signed integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

static list< string > & Split(const CTempString str, const CTempString delim, list< string > &arr, TSplitFlags flags=0, vector< SIZE_TYPE > *token_pos=NULL)

Split a string using specified delimiters.

bool empty(void) const

Return true if the represented string is empty (i.e., the length is zero)

CTempString substr(size_type pos) const

Obtain a substring from this string, beginning at a given offset.

size_type find(const CTempString match, size_type pos=0) const

Find the first instance of the entire matching string within the current string, beginning at an opti...

static const size_type npos

void SetValueInt(TObjectPtr objectPtr, int value) const

virtual void SetValueInt8(TObjectPtr objectPtr, Int8 value) const

virtual void SetValueOctetString(TObjectPtr objectPtr, const vector< char > &value) const

virtual void SetValueDouble(TObjectPtr objectPtr, double value) const

virtual void SetValueString(TObjectPtr objectPtr, const string &value) const

TFields & SetFields(void)

Select the variant.

void SetTag(TTag &value)

Assign a value to Tag data member.

bool IsFields(void) const

Check if variant Fields is selected.

void SetLabel(TLabel &value)

Assign a value to Label data member.

void SetData(TData &value)

Assign a value to Data data member.

void SetDb(const TDb &value)

Assign a value to Db data member.

vector< CRef< CUser_field > > TData

void SetQual(const TQual &value)

Assign a value to Qual data member.

TDbxref & SetDbxref(void)

Assign a value to Dbxref data member.

void SetComment(const TComment &value)

Assign a value to Comment data member.

void SetExt(TExt &value)

Assign a value to Ext data member.

void SetData(TData &value)

Assign a value to Data data member.

void SetVal(const TVal &value)

Assign a value to Val data member.

TQual & SetQual(void)

Assign a value to Qual data member.

bool IsInt(void) const

Check if variant Int is selected.

bool IsPnt(void) const

Check if variant Pnt is selected.

const GenericPointer< typename T::ValueType > T2 value

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