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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/seq__align__mapper__base_8cpp.html below:

NCBI C++ ToolKit: src/objects/seq/seq_align_mapper_base.cpp File Reference

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◆ NCBI_USE_ERRCODE_X ◆ CloneContainer()

template<class T , class C1 , class C2 >

void CloneContainer ( const C1 &  src, C2 &  dst  ) ◆ CopyContainer()

template<class C1 , class C2 >

void CopyContainer ( const C1 &  src, C2 &  dst  ) ◆ IsExonGap() ◆ SetPartLength()

Definition at line 1661 of file seq_align_mapper_base.cpp.

References CSpliced_exon_chunk_Base::e_Diag, CSpliced_exon_chunk_Base::e_Genomic_ins, CSpliced_exon_chunk_Base::e_Match, CSpliced_exon_chunk_Base::e_Mismatch, CSpliced_exon_chunk_Base::e_Product_ins, len, CSpliced_exon_chunk_Base::SetDiag(), CSpliced_exon_chunk_Base::SetGenomic_ins(), CSpliced_exon_chunk_Base::SetMatch(), CSpliced_exon_chunk_Base::SetMismatch(), and CSpliced_exon_chunk_Base::SetProduct_ins().

Referenced by CSeq_align_Mapper_Base::x_PushExonPart().


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