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NCBI C++ ToolKit: include/algo/blast/api/rpsblast_local.hpp Source File

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x_AdjustDbSize(

);

kDisableThreadedSearch = 1;

kAutoThreadedSearch = 0;

num_of_threads = kAutoThreadedSearch);

#define NCBI_XBLAST_EXPORT

NULL operations for other cases.

Declares the CBlastOptionsHandle and CBlastOptionsFactory classes.

unsigned int m_num_of_threads

CLocalRPSBlast(const CLocalRPSBlast &)

CLocalRPSBlast & operator=(const CLocalRPSBlast &)

CRef< CBlastQueryVector > m_query_vector

unsigned int m_num_of_dbs

vector< string > m_rps_databases

CRef< CBlastOptionsHandle > m_opt_handle

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define END_SCOPE(ns)

End the previously defined scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define BEGIN_SCOPE(ns)

Define a new scope.

void Run(void)

Enter the main loop.

NOTE: This file contains work in progress and the APIs are likely to change, please do not rely on th...

Definition of SSeqLoc structure.

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